PUBLICATIONS

Publications

We’re proud to contribute, with our DNA and RNA sequencing services, to a huge number of exciting and cutting-edge scientific projects.
Thank you for trusting us more than 1500 times! Please find a small selection below.
 
Please note, that you can arrange them for your convenience ordered by year, application or field of interest.

Please contact us, if you have published recently and your paper is not listed yet?

Year Application Title Fields of interest
2017 De novo genome analysis Discovery of monoclonal antibodies cross-reactive to novel subserotypes of K. pneumoniae O3,
Nature
https://www.nature.com/articles/s41598-017-06682-2
Micro-
organism
2017 Microbiome
sequencing
Tomato root microbiota and Phytophthora parasitica-associated disease,
Microbiome
http://www.ncbi.nlm.nih.gov/pubmed/28511691
Micro-
organism
2017 Transcriptomics Single-cell transcriptomics uncovers distinct molecular signatures of stem cells in chronic myeloid leukemia,
Nature Medicine
http://www.ncbi.nlm.nih.gov/pubmed/28504724
Human
2017 Microbiome
sequencing
Diabetes-associated microbiota in fa/fa rats is modified by Roux-en-Y gastric bypass ,
The ISME Journal
http://www.ncbi.nlm.nih.gov/pubmed/28524868
Microorganism,
Plant &
Animal
2017 Genomics Mating biology, nuclear DNA content and genetic diversity in spider plant (Cleome gynandra) germplasm from various African countries,
Plant Breeding
http://onlinelibrary.wiley.com/doi/10.1111/pbr.12485/full
Plant &
Animal
2017 De novo genome analysis Genome Sequence of Paracoccus contaminans LMG 29738T, Isolated from a Water Microcosm ,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/28596405
Micro-
organism
2017 Exome enrichment Mutation of Angiopoietin-1 Gene Associates with a New Type of Hereditary Angioedema,
Journal of Allergy and Clinical Immunology
http://www.ncbi.nlm.nih.gov/pubmed/28601681
Human
2017 Targeted
sequencing
Plasmodium P36 determines host cell receptor usage during sporozoite invasion,
eLife
http://www.ncbi.nlm.nih.gov/pubmed/28506360
Micro-
organism
2017 Targeted
sequencing
Particulate array of well-ordered HIV clade C Env trimers elicits neutralizing antibodies that display a unique V2 cap approach,
Immunity
http://www.ncbi.nlm.nih.gov/pubmed/28514687
Plant &
Animal
2017 Targeted
sequencing
New Prodigiosin Derivatives obtained by Mutasynthesis in Pseudomonas putida,
ACS Synthetic Biology
http://www.ncbi.nlm.nih.gov/pubmed/28505410
Micro-
organism
2017 Targeted
sequencing
Lineage-specific functions of TET1 in the postimplantation mouse embryo,
Nature Genetics
http://www.ncbi.nlm.nih.gov/pubmed/28504700
Plant &
Animal
2017 Targeted
sequencing
The DNA translocase RAD5A acts independently of the other main DNA repair pathways and requires both its ATPase and RING domain for activity in Arabidopsis thaliana,
The Plant Journal
http://www.ncbi.nlm.nih.gov/pubmed/28509359
Plant &
Animal
2017 Targeted
sequencing
Survivin, a key player in cancer progression, increases in obesity and protects adipose tissue stem cells from apoptosis,
Cell Death & Disease
http://www.ncbi.nlm.nih.gov/pubmed/28518147
Human
2017 Targeted
sequencing
Enhancing erythritol productivity in Yarrowia lipolytica using metabolic engineering,
Metabolic Engineering
http://www.ncbi.nlm.nih.gov/pubmed/28545807
Micro-
organism
2017 Targeted
sequencing
Two extended haplotype blocks are associated with adaptation to high altitude habitats in East African honey bees,
PLOS Genetics
http://www.ncbi.nlm.nih.gov/pubmed/28542163
Plant &
Animal
2017 De novo genome analysis Genome Sequence of Pasteurella multocida Razi 0002 of Avian Origin,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/28408677
Micro-
organism
2017 Transcriptomics Arabidopsis glucosinolates trigger a contrasting transcriptomic response in a generalist and a specialist herbivore,
Insect Biochemistry and Molecular Biology
http://www.ncbi.nlm.nih.gov/pubmed/28455184
Plant &
Animal
2017 Transcriptomics Normalized long read RNA sequencing in chicken reveals transcriptome complexity similar to human,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/28438136
Plant &
Animal
2017 De novo genome analysis Complete Genome Sequence of the Gamma-Aminobutyric Acid-Producing Strain Streptococcus thermophilus APC151,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/28450504
Micro-
organism
2017 Genomics Spontaneous quorum sensing mutation modulates electroactivity of Pseudomonas aeruginosa PA14,
Bioelectrochemistry
http://www.ncbi.nlm.nih.gov/pubmed/ 28494227
Micro-
organism
2017 Exome enrichment The Genetics of Asymmetry: Whole Exome Sequencing in a Consanguineous Turkish Family with an Overrepresentation of Left-Handedness,
Symmetry
http://www.mdpi.com/2073-8994/9/5/66
Human
2017 De novo genome analysis Draft Genome Sequences of the Aerobic Strains Lactobacillus gasseri AL3 and AL5,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/28473372
Micro-
organism
2017 Genomics The Long Hunt For pssR—looking for a phospholipid synthesis transcriptional regulator, finding the ribosome,
Journal of Bacteriology
http://www.ncbi.nlm.nih.gov/pubmed/28484043
Micro-
organism
2017 Transcriptomics Diversity of the TLR4 Immunity Receptor in Czech Native Cattle Breeds Revealed Using the Pacific Biosciences Sequencing Platform,
Animal Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/28489974
Plant &
Animal
2017 Targeted
sequencing
Alterations in cellular metabolism triggered by URA7 or GLN3 inactivation cause imbalanced dNTP pools and increased mutagenesis,
PNAS
http://www.ncbi.nlm.nih.gov/pubmed/28416670
Micro-
organism
2017 Targeted
sequencing
An unmodified wobble uridine in tRNAs specific for Glutamine, Lysine, and Glutamic acid from Salmonella enterica Serovar Typhimurium results in nonviability-Due to increased missense errors?on,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/28430781
Micro-
organism
2017 Targeted
sequencing
On the permeation of large organic cations through the pore of ATP-gated P2X receptors,
PNAS
http://www.ncbi.nlm.nih.gov/pubmed/28442564
Human
2017 Targeted
sequencing
A new GTF2I-BRAF fusion mediating MAPK pathway activation in pilocytic astrocytoma,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/28448514
Human
2017 Targeted
sequencing
Aging Triggers Cytoplasmic Depletion and Nuclear Translocation of the E3 Ligase Mahogunin: A Function for Ubiquitin in Neuronal Survival,
Molecular Cell
http://www.ncbi.nlm.nih.gov/pubmed/28475871
Human
2017 Targeted
sequencing
Chimeric origins of ochrophytes and haptophytes revealed through an ancient plastid proteome,
eLife
http://www.ncbi.nlm.nih.gov/pubmed/28498102
Micro-
organism
2017 De novo genome analysis The Chloroplast Genome of Passiflora edulis (Passifloraceae) Assembled from Long Sequence Reads: Structural Organization and Phylogenomic Studies in Malpighiales,
Frontiers in Plant Science
http://www.ncbi.nlm.nih.gov/pubmed/28344587
Plant &
Animal
2017 Genomics Draft Genome Sequences of 11 Lactococcus lactis subsp. cremoris Strains,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/28302789
Micro-
organism
2017 Transcriptomics Development of a Robust Mammalian Cell‐based Assay for Studying Recombinant α4β1/3δ GABAA Receptor Subtypes,
Basic&Clinical Pharmacology&Toxicology
http://www.ncbi.nlm.nih.gov/pubmed/28299900
Human
2017 Transcriptomics A Large and Consistent Phylogenomic Dataset Supports Sponges as the Sister Group to All Other Animals,
Current Biology
http://www.ncbi.nlm.nih.gov/pubmed/28318975
Plant &
Animal
2017 De novo genome analysis Brucella spp. of amphibians comprise genomically diverse motile strains competent for replication in macrophages and survival in mammalian hosts,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/28300153
Micro-
organism
2017 Microbiome
sequencing
Benzene degradation in a denitrifying biofilm reactor: activity and microbial community composition,
Applied Microbiology & Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/28321487
Micro-
organism
2017 Microbiome
sequencing
Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests,
Nature Ecology & Evolution
http://www.nature.com/articles/s41559-017-0091
Micro-
organism
2017 Genomics Revision and reannotation of the Halomonas elongata DSM 2581T genome,
MicrobiologyOpen
http://www.ncbi.nlm.nih.gov/pubmed/28349658
Micro-
organism
2017 Genomics Draft Genome Sequences of 24 Lactococcus lactis Strains,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/28360177
Micro-
organism
2017 Genomics Draft Genome Sequence of the Root-Colonizing Fungus Trichoderma harzianum B97,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/28360171
Micro-
organism
2017 De novo genome analysis Comparative and functional genomics of the Lactococcus lactis taxon; insights into evolution and niche adaptation,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/28356072
Micro-
organism
2017 Transcriptomics Transcriptome analysis of the two unrelated fungal β-lactam producers Acremonium chrysogenum and Penicillium chrysogenum: Velvet-regulated genes are major targets during conventional strain improvement programs,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/28359302
Micro-
organism
2017 Targeted
sequencing
The direct role of selenocysteine in (NiFeSe) hydrogenase maturation and catalysis,
Nature Chemical Biology
http://www.ncbi.nlm.nih.gov/pubmed/28319099
Micro-
organism
2017 Targeted
sequencing
Molecular interactions and inhibition of the staphylococcal biofilm-forming protein SdrC,
PNAS
http://www.ncbi.nlm.nih.gov/pubmed/28320940
Micro-
organism
2017 Genomics A vast genomic deletion in the C56BL/6 genome affects different genes within the Ifi200 cluster on chromosome 1 and mediates obesity and insulin resistance,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/28201990
Plant &
Animal
2017 Genomics Draft Genome Sequence of Actinomyces glycerinitolerans Strain G10T, Isolated from Sheep Rumen Fluid,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/28209819
Micro-
organism
2017 Transcriptomics Transcriptomic Profile of Lignocellulose Degradation from Trametes versicolor on Poplar Wood,
BioResources
http://ojs.cnr.ncsu.edu/index.php/BioRes/article/view/
BioRes_12_2_2507_Zhang_Transcriptomic_Profile_Lignocellulose_Degradation
Micro-
organism
2017 Microbiome
sequencing
Changes in rumen microbiota composition and in situ degradation kinetics during the dry period and early lactation as affected by rate of increase of concentrate …,
Journal of Dairy Science
http://www.ncbi.nlm.nih.gov/pubmed/28215888
Microorganism,
Plant &
Animal
2017 Transcriptomics In Arabidopsis thaliana distinct alleles encoding mitochondrial RNA PROCESSING FACTOR 4 support the generation of additional 5′ termini of ccmB transcripts,
Plant Molecular Biology
http://www.ncbi.nlm.nih.gov/pubmed/28229269
Plant &
Animal
2017 De novo genome analysis Structural Alteration of OmpR as a Source of Ertapenem Resistance in a CTX-M-15-Producing Escherichia coli O25b: H4-ST131 Clinical Isolate,
Antimicrobial Agents and Chemotherapy
http://www.ncbi.nlm.nih.gov/pubmed/28264855
Micro-
organism
2017 De novo genome analysis Complete Genome Sequence of a Burkholderia pseudomallei Strain Isolated from a Pet Green Iguana in Prague, Czech Republic,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/28280033
Micro-
organism
2017 Targeted
sequencing
Gene expression control by Bacillus anthracis purine riboswitches,
RNA
http://www.ncbi.nlm.nih.gov/pubmed/ 28209633
Micro-
organism
2017 Targeted
sequencing
Human [gamma][delta] T cells are quickly reconstituted after stem-cell transplantation and show adaptive clonal expansion in response to viral infection,
Nature Immunology
http://www.ncbi.nlm.nih.gov/pubmed/28218745
Human
2017 Targeted
sequencing
Elucidation of the biosynthesis of the methane catalyst coenzyme F430,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/28225763
Micro-
organism
2017 Targeted
sequencing
Mutations in DCC cause isolated agenesis of the corpus callosum with incomplete penetrance,
Nature Genetics
http://www.ncbi.nlm.nih.gov/pubmed/28250454
Human
2017 Targeted
sequencing
Autonomous Generation and Loading of DNA Guides by Bacterial Argonaute,
Molecular Cell
http://www.ncbi.nlm.nih.gov/pubmed/28262506
Micro-
organism
2017 Targeted
sequencing
Structural basis of homo-and heterotrimerization of collagen I,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/28281531
Human
2017 Genomics Dissemination of blaOXA-58 in Proteus mirabilis isolates from Germany,
Journal of Antimicrobial Chemotherapy
http://www.ncbi.nlm.nih.gov/pubmed/28093482
Micro-
organism
2017 Microbiome
sequencing
The Composition of Human Milk and Infant Faecal Microbiota Over the First Three Months of Life: A Pilot Study,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/28094284
Micro-
organism
2017 Transcriptomics De novo transcriptome assembly of heavy metal tolerant Silene dioica ,
Genomics Data
http://www.ncbi.nlm.nih.gov/pubmed/28180085
Plant &
Animal
2017 Genomics New Mycobacterium tuberculosis Complex Sublineage, Brazzaville, Congo ,
Emerging Infectious Diseases
https://wwwnc.cdc.gov/eid/article/23/3/16-0679_article
Micro-
organism
2017 Transcriptomics Functional PTB phosphate transporters are present in streptophyte algae and early diverging land plants.,
New Phytologist
http://www.ncbi.nlm.nih.gov/pubmed/28134432
Plant &
Animal
2017 Transcriptomics Epigenetic regulation of lateralized fetal spinal gene expression underlies hemispheric asymmetries,
eLife
http://www.ncbi.nlm.nih.gov/pubmed/28145864
Human
2017 Transcriptomics The genome of the protozoan parasite Cystoisospora suis and a reverse vaccinology approach to identify vaccine candidates.,
International Journal for Parasitology
http://www.ncbi.nlm.nih.gov/pubmed/28161402
Micro-
organism
2017 Targeted
sequencing
Secretory pathway optimization of CHO producer cells by co-engineering of the mitosRNA-1978 target genes CerS2 and Tbc1D20,
Metabolic Engineering
http://www.ncbi.nlm.nih.gov/pubmed/28088541
Plant &
Animal
2017 Targeted
sequencing
A Superoxide Dismutase Capable of Functioning with Iron or Manganese Promotes the Resistance of Staphylococcus aureus to Calprotectin and Nutritional Immunity,
PLoS Pathogens
http://www.ncbi.nlm.nih.gov/pubmed/28103306
Micro-
organism
2017 Targeted
sequencing
Phylointeractomics reconstructs functional evolution of protein binding,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/28176777
Human,
Plant &
Animal
2017 Targeted
sequencing
Intrinsically disordered proteins drive enamel formation via an evolutionarily conserved self-assembly motif,
PNAS
http://www.ncbi.nlm.nih.gov/pubmed/28196895
Human,
Plant &
Animal
2017 Mycoplasma
detection
Zika virus causes supernumerary foci with centriolar proteins and impaired spindle positioning,
Exmple Journal
http://www.ncbi.nlm.nih.gov/pubmed/28100662
Mycoplasma
2017 Genomics The sole introduction of two single-point mutations establishes glycerol utilization in Saccharomyces cerevisiae CEN. PK derivatives,
Biotechnology for Biofuels
http://www.ncbi.nlm.nih.gov/pubmed/28053667
Micro-
organism
2017 Targeted
sequencing
Genome sequence and genetic diversity of European ash trees,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/28024298
Plant &
Animal
2017 Genomics Estimating genomic diversity and population differentiation–an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/28077077
Micro-
organism
2017 Genomics Complete genome sequence of the heavy metal resistant bacterium Agromyces aureus AR33 T and comparison with related Actinobacteria,
Standards in Genomic Sciences
http://www.ncbi.nlm.nih.gov/pubmed/28074120
Micro-
organism
2017 De novo genome analysis Complete genome sequence of Pseudomonas brassicacearum strain L13-6-12, a biological control agent from the rhizosphere of potato,
Standards in Genomic Sciences
http://www.ncbi.nlm.nih.gov/pubmed/28078051
Micro-
organism
2017 Targeted
sequencing
Antibacterial and antivirulence effect of 6-N-hydroxylaminopurine in Listeria monocytogenes,
Nucleic Acids Research
http://www.ncbi.nlm.nih.gov/pubmed/28062853
Micro-
organism
2016 Genomics Within Host Evolution Selects for a Dominant Genotype of Mycobacterium tuberculosis while T Cells Increase Pathogen Genetic Diversity,
PLOS Pathogens
http://www.ncbi.nlm.nih.gov/pubmed/27973588
Micro-
organism
2016 Transcriptomics When the brain goes diving: transcriptome analysis reveals a reduced aerobic energy metabolism and increased stress proteins in the seal brain,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/27507242
Plant&
Animal
2016 Genomics Wall proficient E. coli capable of sustained growth in the absence of the Z-ring division machine,
Nature Microbiology
http://www.nature.com.edgesuite.net/articles/nmicrobiol201691
Micro-
organism
2016 Targeted
sequencing
Unlike in Children with Allergic Asthma,
IgE Transcripts from Preschool Children with Atopic Dermatitis Display Signs of Superantigen-Driven Activation,
The Journal of Immunology
http://www.ncbi.nlm.nih.gov/pubmed/27183570
Human
2016 Targeted
sequencing
Twister ribozymes as highly versatile expression platforms for artificial riboswitches ,
Nature Communications
https://www.ncbi.nlm.nih.gov/pubmed/27670347
Micro-
organism
2016 Targeted
sequencing
Tumour-cell-induced endothelial cell necroptosis via death receptor 6 promotes metastasis,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/27487218
Human
2016 Targeted
sequencing
TssA forms a gp6‐like ring attached to the type VI secretion sheath,
The EMBO Journal
http://www.ncbi.nlm.nih.gov/pubmed/27288401
Micro-
organism
2016 Microbiome
sequencing
Tryptophan restriction arrests B cell development and enhances microbial diversity in WT and prematurely aging Ercc1−/Δ7 mice,
Journal of Leukocyte Biology
http://www.ncbi.nlm.nih.gov/pubmed/27418353
Plant&
Animal
2016 Genomics TruePrime is a novel method for whole-genome amplification from single cells based on TthPrimPol,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/27897270
Human
2016 Targeted
sequencing
TREM2 deficiency reduces the efficacy of immunotherapeutic amyloid clearance,
EMBO Molecular Medicine
http://www.ncbi.nlm.nih.gov/pubmed/27402340
Human
2016 Targeted
sequencing
Translational regulation of APOBEC3G mRNA by Vif requires its 5′ UTR and contributes to restoring HIV-1 infectivity,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/27996044
Human,
Microorganism
2016 Transcriptomics Transfer RNA is highly unstable during early amino acid starvation in Escherichia coli,
Nucleic Acids Research
http://www.ncbi.nlm.nih.gov/pubmed/27903898
Micro-
organism
2016 Transcriptomics Transcriptome of larvae representing the Rhipicephalus sanguineus complex,
Molecular and Cellular Probes
http://www.ncbi.nlm.nih.gov/pubmed/26921517
Plant &
Animal
2016 ChIP-Seq Transcription factor PRO1 targets genes encoding conserved components of fungal developmental signaling pathways,
Molecular Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/27560538
Micro-
organism
2016 Transcriptomics Towards a DNA Barcode Reference Database for Spiders and Harvestmen of Germany,
PLoS One
https://www.ncbi.nlm.nih.gov/pubmed/27681175
Plant &
Animal
2016 Exome enrichment Thrombotic Microangiopathy in Inverted Formin 2-Mediated Renal Disease.,
Journal of the American Society of Nephrology
http://www.ncbi.nlm.nih.gov/pubmed/27974406
Human
2016 Targeted
sequencing
The α-terpineol to 1, 8-cineole cyclization reaction of tobacco terpene synthases,
Plant Physiology
https://www.ncbi.nlm.nih.gov/pubmed/27729471
Plant &
Animal
2016 Transcriptomics The Transcriptional Response to DNA-Double-Strand Breaks in Physcomitrella patens,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/27537368
Plant&
Animal
2016 Targeted
sequencing
The Splicing Efficiency of Activating HRAS Mutations Can Determine Costello Syndrome Phenotype and Frequency in Cancer,
PLoS Genetics
http://www.ncbi.nlm.nih.gov/pubmed/27195699
Human
2016 Microbiome
sequencing
The Root-Associated Microbial Community of the World's Highest Growing Vascular Plants,
Microbial Ecology
http://www.ncbi.nlm.nih.gov/pubmed/27245598
Micro-
organism
2016 Targeted
sequencing
The Polycomb Group Protein Pcgf1 Is Dispensable in Zebrafish but Involved in Early Growth and Aging,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/27442247
Plant&
Animal
2016 De novo genome analysis The Identification of Novel Diagnostic Marker Genes for the Detection of Beer Spoiling Pediococcus damnosus Strains Using the BlAst Diagnostic Gene findEr,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/27028007
Micro-
organism
2016 Genomics The genome of a landlocked Atlantic salmon Salmo salar characterized through high-throughput sequencing,
Journal of Evolutionary Biology Research
http://www.academicjournals.org/journal/JEBR/edition/October_2016
Plant &
Animal
2016 Targeted
sequencing
The Fanconi anemia DNA damage repair pathway in the spotlight for germline predisposition to colorectal cancer,
European Journal of Human Genetics
http://www.ncbi.nlm.nih.gov/pubmed/27165003
Human
2016 Microbiome
sequencing
The Cucurbita pepo seed microbiome: genotype-specific composition and implications for breeding,
Plant&Soil
http://link.springer.com/article/10.1007/s11104-016-3113-9
Micro-
organism
2016 Targeted
sequencing
The conifer biomarkers dehydroabietic and abietic acids are widespread in Cyanobacteria,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/26996104
Micro-
organism
2016 Targeted
sequencing
The cAMP pathway regulates mRNA decay through phosphorylation of the RNA-Binding Protein TIS11b/BRF1F ,
Molecular Biology of the Cell
https://www.ncbi.nlm.nih.gov/pubmed/27708140
Human
2016 Mycoplasma
detection
The biomechanical properties of an epithelial tissue determine the location of its vasculature.,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/27995929
Mycoplasma
2016 Targeted
sequencing
Systems-level effects of ectopic galectin-7 reconstitution in cervical cancer and its microenvironment,
BMC Cancer
http://www.ncbi.nlm.nih.gov/pubmed/27558259
Human
2016 Targeted
sequencing
Synthetically derived bat influenza A-like viruses reveal a cell type-but not species-specific tropism,
PNAS
http://www.ncbi.nlm.nih.gov/pubmed/27791106
Micro-
organism
2016 Exome enrichment Study of breast cancer incidence in patients of lymphangioleiomyomatosis,
Breast Cancer Research and Treatment
http://www.ncbi.nlm.nih.gov/pubmed/26951504
Human
2016 Targeted
sequencing
Structural constraints and enzymatic promiscuity in the Cas6-dependent generation of crRNAs ,
Nucleic Acids Research
https://www.ncbi.nlm.nih.gov/pubmed/27599840
Micro-
organism
2016 Microbiome
sequencing
Species-level core oral bacteriome identified by 16S rRNA pyrosequencing in a healthy young Arab population,
Journal of Oral Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/27193835
Micro-
organism
2016 Exome enrichment Spatial niche formation but not malignant progression is a driving force for intratumoural heterogeneity,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/27291893
Human
2016 Microbiome
sequencing
Spatial Distribution of Eukaryotic Communities Using High-Throughput Sequencing Along a Pollution Gradient in the Arsenic-Rich Creek Sediments of Carnoulès …,
Microbial Ecology
http://www.ncbi.nlm.nih.gov/pubmed/27535039
Micro-
organism
2016 Targeted
sequencing
Sleep recalibrates homeostatic and associative synaptic plasticity in the human cortex,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/27551934
Human
2016 Targeted
sequencing
Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos,
Cell
http://www.ncbi.nlm.nih.gov/pubmed/27062923
Human
2016 Exome enrichment Sequence and expression of complement factor H gene cluster variants and their roles in age-related macular degeneration risk,
Investigative Ophthalmology & Visual Science
http://www.ncbi.nlm.nih.gov/pubmed/27196323
Human
2016 Microbiome
sequencing
Seasonality of antibiotic prescriptions for outpatients and resistance genes in sewers and wastewater treatment plant outflow,
FEMS Microbiology Ecology
http://www.ncbi.nlm.nih.gov/pubmed/27073234
Micro-
organism
2016 De novo genome analysis Refined Pichia pastoris reference genome sequence,
Journal of Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/27084056
Micro-
organism
2016 Targeted
sequencing
Redesigning Aldolase Stereoselectivity by Homologous Grafting,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/27327271
Micro-
organism
2016 Transcriptomics Reconstructing ecosystem functions of the active microbial community of the Baltic Sea oxygen depleted sediments,
PeerJ
http://www.ncbi.nlm.nih.gov/pubmed/26823996
Micro-
organism
2016 Exome enrichment Recessive NEK9 mutation causes a lethal skeletal dysplasia with evidence of cell cycle and ciliary defects,
Human Molecular Genetics
http://www.ncbi.nlm.nih.gov/pubmed/26908619
Human
2016 Transcriptomics Quantitative and qualitative transcriptome analysis of four industrial strains of Claviceps purpurea with respect to ergot alkaloid production,
New Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/26827914
Micro-
organism
2016 ChIP-Seq Prolyl hydroxylase-1 regulates hepatocyte apoptosis in an NF-κB-dependent manner,
Biochemical and Biophysical Research Communications
http://www.ncbi.nlm.nih.gov/pubmed/27130823
Human
2016 Microbiome
sequencing
Probiotic legacy effects on gut microbial assembly in tilapia larvae,
Scientific Reports
https://www.ncbi.nlm.nih.gov/pubmed/27670882
Microorganism,
Plant &
Animal
2016 Transcriptomics Preferential Binding of a stable G3BP Ribonucleoprotein Complex to Intron‐retaining Transcripts in Mouse Brain and Modulation of their Expression in the Cerebellum,
Journal of Neurochemistry
http://www.ncbi.nlm.nih.gov/pubmed/27513819
Plant&
Animal
2016 Targeted
sequencing
ppGpp negatively impacts ribosome assembly affecting growth and antimicrobial tolerance in Gram-positive bacteria,
Proceedings of the National Academy of Sciences
http://www.ncbi.nlm.nih.gov/pubmed/26951678
Micro-
organism
2016 Transcriptomics Potato tuber expression of Arabidopsis WRINKLED1 increase triacylglycerol and membrane lipids while affecting central carbohydrate metabolism,
Plant Biotechnology Journal
http://www.ncbi.nlm.nih.gov/pubmed/26914183
Plant &
Animal
2016 Microbiome
sequencing
Phylogenetic and functional characterization of the distal intestinal microbiome of rainbow trout Oncorhynchus mykiss from both farm and aquarium settings,
Journal of Applied Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/27860093
Microorganism,
Plant &
Animal
2016 Targeted
sequencing
Only the complex N559-glycan in SV2C mediates high affinity binding to botulinum neurotoxin serotype A1,
Biochemical Journal
http://www.ncbi.nlm.nih.gov/pubmed/27313224
Human,
Microorganism,
Plant &
Animal
2016 Targeted
sequencing
N-terminal tetrapeptide T/SPLH motifs contribute to multimodal activation of human TRPA1 channel,
Scientific reports
http://www.ncbi.nlm.nih.gov/pubmed/27345869
Human
2016 Genomics New insights from an old mutant: SPADIX4 governs fruiting body development but not hyphal fusion in Sordaria macrospora,
Molecular Genetics and Genomics
http://www.ncbi.nlm.nih.gov/pubmed/27770259
Micro-
organism
2016 Microbiome
sequencing
Mungo bean sprout microbiome and changes associated with culture based enrichment protocols used in detection of Gram-negative foodborne pathogens,
Microbiome
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5012049/
Micro-
organism
2016 De novo genome analysis Multiple Origins of the Pathogenic Yeast Candida orthopsilosis by Separate Hybridizations between Two Parental Species,
PLoS Genetics
http://www.ncbi.nlm.nih.gov/pubmed/27806045
Micro-
organism
2016 Genomics Multiple independent transmission cycles of a tick-borne pathogen within a local host community,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/27498685
Plant&
Animal,
Micro-
organism
2016 De novo genome analysis Multiple Genome Sequences of the Important Beer-Spoiling Species Lactobacillus backii,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/27563041
Micro-
organism
2016 Transcriptomics Most photorespiratory genes are preferentially expressed in the bundle sheath cells of the C4 grass Sorghum bicolor,
Journal of Experimental Botany
http://www.ncbi.nlm.nih.gov/pubmed/26976818
Plant &
Animal
2016 Microbiome
sequencing
Molecular Properties of Guar Gum and Pectin Modify Cecal Bile Acids,
Microbiota,
and Plasma Lipopolysaccharide-Binding Protein in Rats,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/27315087
Microorganism,
Plant &
Animal
2016 Targeted
sequencing
Modulation of Re-initiation of Measles Virus Transcription at Intergenic Regions by PXD to NTAIL Binding Strength,
PLOS Pathogens
http://www.ncbi.nlm.nih.gov/pubmed/27936158
Micro-
organism
2016 Genomics Mitogenomic phylogeny, diversification, and biogeography of South American spiny rats,
Molecular Biology and Evolution
http://www.ncbi.nlm.nih.gov/pubmed/28025278
Plant &
Animal
2016 Targeted
sequencing
Microbial communities affecting albumen photography heritage: a methodological survey,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/26864429
Micro-
organism
2016 De novo genome analysis MALDI-TOF Mass Spectrometry Enables a Comprehensive and Fast Analysis of Dynamics and Qualities of Stress Responses of Lactobacillus paracasei subsp. paracasei F19.,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/27783652
Micro-
organism
2016 Targeted
sequencing
Low Input Whole-Exome Sequencing to Determine the Representation of the Tumor Exome in Circulating DNA of Non-Small Cell Lung Cancer Patient,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/27529345
Human
2016 Microbiome
sequencing
Lingonberries alter the gut microbiota and prevent low-grade inflammation in high-fat diet fed mice,
Food & Nutrition Research
http://www.ncbi.nlm.nih.gov/pubmed/27125264
Plant &
Animal
2016 Targeted
sequencing
Interrogating the degradation pathways of unstable mRNAs with XRN1-resistant sequences.,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/27917860
Human
2016 Targeted
sequencing
Infectious Salmon Anaemia Virus (ISAV) RNA Binding Protein Encoded by Segment 8 ORF2 and Its Interaction with ISAV and Intracellular Proteins,
Viruses
http://www.ncbi.nlm.nih.gov/pubmed/26901217
Micro-
organism
2016 Transcriptomics Identification and characterisation of hemocyanin of the fish louse Argulus (Crustacea: Branchiura),
Journal of Comparative Physiology B
http://www.ncbi.nlm.nih.gov/pubmed/26515963
Plant &
Animal
2016 Genomics High-Quality Draft Genome Sequence of an Endophytic Pseudomonas viridiflava Strain with Herbicidal Properties against Its Host, the Weed Lepidium draba L.,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/27795282
Micro-
organism
2016 Targeted
sequencing
Glycomic characterization of induced pluripotent stem cells derived from a patient suffering from phosphomannomutase 2 congenital disorder of glycosylation,
Molecular & Cellular Proteomics
http://www.ncbi.nlm.nih.gov/pubmed/26785728
Human
2016 Transcriptomics Global transcriptome changes in perennial ryegrass during early infection by pink snow mould,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/27346054
Plant &
Animal
2016 Targeted
sequencing
Global phylogeography and evolutionary history of Shigella dysenteriae type 1,
Nature Microbiology
http://www.nature.com/articles/nmicrobiol201627
Micro-
organism
2016 Transcriptomics Global analysis of somatic structural genomic alterations and their impact on gene expression in diverse human cancers,
PNAS
http://www.ncbi.nlm.nih.gov/pubmed/27856756
Human
2016 Microbiome
sequencing
Geochemical and microbial community determinants of reductive dechlorination at a site biostimulated with glycerol,
Environmental Microbiology
https://www.ncbi.nlm.nih.gov/pubmed/27631786
Micro-
organism
2016 Genomics Genomic and phenotypic differentiation of Arabidopsis thaliana along altitudinal gradients in the North Italian Alps,
Molecular Ecology
http://www.ncbi.nlm.nih.gov/pubmed/27220345
Plant &
Animal
2016 Genomics Genome Sequence of the K139-Like Phage VcP032 Originating from the Vibrio cholerae O1 El Tor Ogawa Serotype,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/27445393
Micro-
organism
2016 Targeted
sequencing
Genetically encoded photocrosslinkers locate the high-affinity binding site of antidepressant drugs in the human serotonin transporter,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/27089947
Human
2016 Targeted
sequencing
Generation of Anti-Murine ADAMTS13 Antibodies and Their Application in a Mouse Model for Acquired Thrombotic Thrombocytopenic Purpura,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/27479501
Plant&
Animal
2016 Targeted
sequencing
Generation of an iPSC line from a patient with tyrosine hydroxylase (TH) deficiency: TH-1 iPSC,
Stem Cell Research
http://www.sciencedirect.com/science/article/pii/S1873506116301684
Human
2016 Targeted
sequencing
Galectin-1 dimers can scaffold Raf-effectors to increase H-ras nanoclustering,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/27087647
Human,
Plant &
Animal
2016 Microbiome
sequencing
Fire modifies the phylogenetic structure of soil bacterial co‐occurrence networks,
Environmental Microbiology
https://www.ncbi.nlm.nih.gov/pubmed/27871135
Micro-
organism
2016 Base modification analysis Finished genome sequence and methylome of the cyanide-degrading Pseudomonas pseudoalcaligenes strain CECT5344 as resolved by single-molecule real-time sequencing,
Journal of Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/27060556
Micro-
organism
2016 Targeted
sequencing
FGFR2 risk SNPs confer breast cancer risk by augmenting estrogen responsiveness,
Carcinogenesis
http://www.ncbi.nlm.nih.gov/pubmed/27236187
Human
2016 Transcriptomics Fast type I interferon response protects astrocytes from flavivirus infection and virus-induced cytopathic effects,
Journal of Neuroinflammation
http://www.ncbi.nlm.nih.gov/pubmed/27776548
Microorganism,
Plant &
Animal
2016 Targeted
sequencing
Experimental piscine alphavirus RNA recombination in vivo yields both viable virus and defective viral RNA,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/27805034
Microorganism,
Plant &
Animal
2016 Microbiome
sequencing
Evidence for plasmid mediated salt tolerance in the human gut microbiome and potential mechanisms,
FEMS Microbiology Ecology
http://www.ncbi.nlm.nih.gov/pubmed/26850157
Human,
Microorganism
2016 Targeted
sequencing
Establishment of an Immortalized Skin Keratinocyte Cell Line Derived from the Animal Model Mastomys coucha,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/27533138
Plant&
Animal
2016 Targeted
sequencing
Epigenetic regulation of diacylglycerol kinase alpha promotes radiation-induced fibrosis,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/26964756
Human
2016 Targeted
sequencing
Engineering orthogonal dual transcription factors for multi-input synthetic promoters,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/27982027
Micro-
organism
2016 Microbiome
sequencing
Endemic plants harbour specific Trichoderma communities with an exceptional potential for biocontrol of phytopathogens,
Journal of Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/27039271
Micro-
organism
2016 Exome enrichment Emergence of resistance to tyrosine kinase inhibitors in non-small-cell lung cancer can be delayed by an upfront combination with the HSP90 inhibitor onalespib,
British Journal of Cancer
https://www.ncbi.nlm.nih.gov/pubmed/27673365
Human
2016 Microbiome
sequencing
Effects of pectin supplementation on the fermentation patterns of different structural carbohydrates in rats,
Molecular Nutrition & Food Research
http://www.ncbi.nlm.nih.gov/pubmed/27174558
Micro-
organism
2016 Microbiome
sequencing
Effects of different media on the enrichment of low numbers of Shiga toxin-producing Escherichia coli in mung bean sprouts and on the development of the sprout microbiome,
International Journal of Food Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/27240217
Micro-
organism
2016 Transcriptomics Ecological speciation in sympatric palms: 1. Gene expression,
selection and pleiotropy,
International Journal of Food Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/27177130
Plant &
Animal
2016 Targeted
sequencing
Early hypermethylation of hepatic Igfbp2 results in its reduced expression preceding fatty liver in mice,
Science Translational Medicine
http://www.ncbi.nlm.nih.gov/pubmed/27126637
Plant &
Animal
2016 De novo genome analysis Draft Genome Sequences of Three European Laboratory Derivatives from Enterohemorrhagic Escherichia coli O157: H7 Strain EDL933,
Including Two Plasmids,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/27056239
Micro-
organism
2016 De novo genome analysis Draft Genome Sequence of Biocontrol Agent Pythium oligandrum Strain Po37,
an Oomycota,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/27081125
Micro-
organism
2016 Genomics Diverse CRISPR-Cas responses and dramatic cellular DNA changes and cell death in pKEF9-conjugated Sulfolobus species,
Nucleic Acids Research
http://www.ncbi.nlm.nih.gov/pubmed/27098036
Micro-
organism
2016 De novo genome analysis Dissection of exopolysaccharide biosynthesis in Kozakia baliensis,
Microbial Cell Factories
https://www.ncbi.nlm.nih.gov/pubmed/27716345
Microorganism,
Plant &
Animal
2016 Targeted
sequencing
Discrimination of post-harvest coffee processing methods by microbial ecology analyses,
Food Control
http://www.sciencedirect.com/science/article/pii/S0956713516300238
Plant &
Animal
2016 Targeted
sequencing
Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells,
Scientific Reports
https://www.ncbi.nlm.nih.gov/pubmed/27713552
Microorganism,
Plant &
Animal
2016 De novo genome analysis Development of genomic tools in a widespread tropical tree, Symphonia globulifera Lf: a new low‐coverage draft genome, SNP and SSR markers,
Molecular Ecology Resources
https://www.ncbi.nlm.nih.gov/pubmed/27718316
Plant &
Animal
2016 Targeted
sequencing
Development of a synthetic gene network to modulate gene expression by mechanical forces,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/27404994
Human
2016 Microbiome
sequencing
Dechlorination of three tetrachlorobenzene isomers by contaminated harbor sludge-derived enrichment cultures follows thermodynamically favorable reactions,
Applied Microbiology and Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/27909745
Micro-
organism
2016 Targeted
sequencing
CYP3A5 mediates basal and acquired therapy resistance in different subtypes of pancreatic ductal adenocarcinoma,
Nature Medicine
http://www.ncbi.nlm.nih.gov/pubmed/26855150
Human
2016 Targeted
sequencing
CRISPR RNA-guided FokI nucleases repair a PAH variant in a phenylketonuria model,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/27786189
Plant &
Animal
2016 Genomics Contrasting effects of historical contingency on phenotypic and genomic trajectories during a two-step evolution experiment with bacteria,
BMC Evolutionary Biology
http://www.ncbi.nlm.nih.gov/pubmed/27108090
Micro-
organism
2016 De novo genome analysis Complete Genome Sequences of Two Methicillin-Sensitive Staphylococcus aureus Isolates Representing a Population Subset Highly Prevalent in Human Colonization,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/27469954
Micro-
organism
2016 De novo genome analysis Complete genome sequences of the Serratia plymuthica strains 3Rp8 and 3Re4-18, two rhizosphere bacteria with antagonistic activity towards fungal phytopathogens ,
Standards in Genomic Sciences
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5012090/
Micro-
organism
2016 De novo genome analysis Complete Genome Sequence of Delftia tsuruhatensis CM13 Isolated from Murine Proximal Colonic Tissue,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/27979948
Micro-
organism
2016 De novo genome analysis Complete Genome Sequence of a Burkholderia mallei Isolate Originating from a Glanderous Horse from the Kingdom of Bahrain,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/27908988
Micro-
organism
2016 Targeted
sequencing
Competitive Mirror Image Phage Display Derived Peptide Modulates Amyloid Beta Aggregation and Toxicity,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/26840229
Human
2016 Targeted
sequencing
Cl-out is a novel cooperative optogenetic tool for extruding chloride from neurons,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/27853135
Plant &
Animal
2016 Genomics Clonality of erythromycin resistance in Francisella tularensis,
Journal of Antimicrobial Chemotherapy
http://www.ncbi.nlm.nih.gov/pubmed/27334667
Micro-
organism
2016 Targeted
sequencing
Characterization of the complex formed by β-glucocerebrosidase and the lysosomal integral membrane protein type-2,
Proceedings of the National Academy of Sciences
http://www.ncbi.nlm.nih.gov/pubmed/27001828
Human
2016 Targeted
sequencing
Changing POU dimerization preferences converts Oct6 into a pluripotency inducer,
EMBO Reports
http://www.ncbi.nlm.nih.gov/pubmed/28007765
Human
2016 Targeted
sequencing
Black perithecial pigmentation in Fusarium species is due to the accumulation of 5-deoxybostrycoidin-based melanin,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/27193384
Micro-
organism
2016 Microbiome
sequencing
Biogeography and Photosynthetic Biomass of Arctic Marine Pico-Eukaroytes during Summer of the Record Sea Ice Minimum 2012,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/26895333
Micro-
organism
2016 Targeted
sequencing
Biogeography and environmental genomics of the Roseobacter-affiliated pelagic CHAB-I-5 lineage,
Nature Microbiology
http://www.nature.com/articles/nmicrobiol201663
Micro-
organism
2016 Targeted
sequencing
Bacterial community dynamics during ensiling of perennial ryegrass at two compaction levels monitored by terminal restriction fragment length polymorphism,
Journal of Applied Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/26923533
Micro-
organism
2016 De novo genome analysis Antibiotic resistance,
core-genome and protein expression in IncHI1 plasmids in Salmonella Typhimurium,
Genome Biology and Evolution
http://www.ncbi.nlm.nih.gov/pubmed/27189997
Micro-
organism
2016 Targeted
sequencing
Analyzing structure–function relationships of artificial and cancer-associated PARP1 variants by reconstituting TALEN-generated HeLa PARP1 knock-out cells,
Nucleic Acid Research
https://www.ncbi.nlm.nih.gov/pubmed/27694308
Human
2016 De novo genome analysis A Viral Immunity Chromosome in the Marine Picoeukaryote, Ostreococcus tauri,
PLoS Pathogens
http://www.ncbi.nlm.nih.gov/pubmed/27788272
Micro-
organism
2016 Targeted
sequencing
A threshold of endogenous stress is required to engage cellular response to protect against mutagenesis,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/27406380
Plant &
Animal
2016 Targeted
sequencing
A part toolbox to tune genetic expression in Bacillus subtilis,
Nucleic Acid Research
http://www.ncbi.nlm.nih.gov/pubmed/27402159
Micro-
organism
2016 Targeted
sequencing
A mutation in VPS15 (PIK3R4) causes a ciliopathy and affects IFT20 release from the cis-Golgi,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/27882921
Human
2016 Genomics A bacterial artificial chromosome (BAC) genomic approach reveals partial clustering of the furanocoumarin pathway genes in parsnip,
The Plant Journal
http://www.ncbi.nlm.nih.gov/pubmed/27943460
Plant &
Animal
2016 Targeted
sequencing
5-methylcytosine-sensitive variants of Thermococcus kodakaraensis DNA polymerase,
Nucleic Acids Research
https://www.ncbi.nlm.nih.gov/pubmed/27651460
Micro-
organism
2016 Targeted
sequencing
IRF7 inhibition prevents destructive innate immunity—A target for nonantibiotic therapy of bacterial infections,
Human Molecular Genetics
http://www.ncbi.nlm.nih.gov/pubmed/27122612
Human
2015 Transcriptomics Venomics of the Australian eastern brown snake (Pseudonaja textilis): Detection of new venom proteins and splicing variants,
Toxicon
http://www.ncbi.nlm.nih.gov/pubmed/26079951
Plant &
Animal
2015 Transcriptomics Using RNA-Seq to assemble a rose transcriptome with more than 13,000 full-length expressed genes and to develop the WagRhSNP 68k Axiom SNP array for rose (Rosa L.),
Frontiers in Plant Science
http://www.ncbi.nlm.nih.gov/pubmed/25954285
Plant&
Animal
2015 De novo genome analysis Under-detection of endospore-forming Firmicutes in metagenomic data,
Computational and Structural Biotechnology Journal
http://www.ncbi.nlm.nih.gov/pubmed/25973144
Micro-
organism
2015 Targeted re-
sequencing & Genome
Transhydrogenase Promotes the Robustness and Evolvability of E. coli Deficient in NADPH Production,
PLOS Genetics
http://www.ncbi.nlm.nih.gov/pubmed/25715029
Micro-
organism
2015 Transcriptomics Transcriptome Analysis of CD4+ T Cells in Coeliac Disease Reveals Imprint of BACH2 and IFNγ Regulation,
PloS one
http://www.ncbi.nlm.nih.gov/pubmed/26444573
Human
2015 Transcriptomics Trancriptomic approach reveals the molecular diversity of Hottentotta conspersus (Buthidae) venom,
Toxicon
http://www.ncbi.nlm.nih.gov/pubmed/25816998
Plant &
Animal
2015 Targeted
sequencing
The Role of Telomerase Protein TERT in Alzheimer's Disease and in Tau-Related Pathology In Vitro,
The Journal of Neuroscience
http://www.ncbi.nlm.nih.gov/pubmed/25632141
Human
2015 Targeted
sequencing
The recurrent chromosomal translocation t (12; 18)(q14~ 15; q12~ 21) causes the fusion gene HMGA2-SETBP1 and HMGA2 expression in lipoma and osteochondrolipoma,
International Journal of Oncology
http://www.ncbi.nlm.nih.gov/pubmed/26202160
Human
2015 Microbiome
sequencing
The impact of rearing environment on the development of gut microbiota in tilapia larvae,
Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/26658351
Micro-
organism
2015 De novo genome analysis The assembly and characterisation of two structurally distinct cattle MHC class I haplotypes point to the mechanisms driving diversity,
Immunogenetics
http://www.ncbi.nlm.nih.gov/pubmed/26227296
Plant &
Animal
2015 Transcriptomics Stepwise B-cell-dependent expansion of T helper clonotypes diversifies the T-cell response,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/26728651
Plant &
Animal
2015 Targeted
sequencing
SOX11 identified by target gene evaluation of miRNAs differentially expressed in focal and non-focal brain tissue of therapy-resistant epilepsy patients,
Neurobiology of Disease
http://www.ncbi.nlm.nih.gov/pubmed/25766675
Human
2015 De novo genome analysis SMRT sequencing only de novo assembly of the sugar beet (Beta vulgaris) chloroplast genome,
BMC Bioinformatics
http://www.ncbi.nlm.nih.gov/pubmed/26377912
Plant &
Animal
2015 Microbiome
sequencing
Robust species taxonomy assignment algorithm for 16S rRNA NGS reads: application to oral carcinoma samples,
Journal of Oral Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/26426306
Micro-
organism
2015 Transcriptomics RNAseq analysis of Aspergillus fumigatus in blood reveals a just wait and see resting stage behavior,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/26311470
Plant &
Animal
2015 Microbiome
sequencing
Rhizosphere bacteria and fungi associated with plant growth in soils of three replanted apple orchards,
Plant and Soils
http://link.springer.com/article/10.1007%2Fs11104-015-2562-x
Plant &
Animal
2015 Targeted
sequencing
Regulation of the Expression of Heparan Sulfate 3-O-Sulfotransferase 3B (HS3ST3B) by Inflammatory Stimuli in Human Monocytes,
Journal of Cellular Biochemistry
http://www.ncbi.nlm.nih.gov/pubmed/26575945
Human
2015 Targeted
sequencing
Rational Design of an Efficient,
Genetically-Encodable,
Protein-Encased Singlet Oxygen Photosensitizer,
Journal of the American Chemical Society
http://www.ncbi.nlm.nih.gov/pubmed/25575190
Human,
Microorganism,
Plant &
Animal
2015 Targeted
sequencing
PTEN regulates IGF‐1R mediated therapy resistance in melanoma,
Pigment Cell & Melanoma
http://www.ncbi.nlm.nih.gov/pubmed/26112748
Human
2015 Targeted
sequencing
Production of 3-hydroxypropionic acid from 3-hydroxypropionaldehyde by recombinant Escherichia coli co-expressing Lactobacillus reuteri propanediol utilization enzymes,
Bioresource Technology
http://www.ncbi.nlm.nih.gov/pubmed/25614245
Micro-
organism
2015 Transcriptomics Post-transcriptional gene silencing triggered by sense transgenes involves uncapped antisense RNA and differs from silencing intentionally triggered by antisense transgenes,
Nucleic Acids Research
http://www.ncbi.nlm.nih.gov/pubmed/26209135
Plant &
Animal
2015 Transcriptomics Photosynthetic genes and genes associated with the C4 trait in maize are characterized by a new class of highly regulated histone acetylation peaks on upstream promoters,
Plant Physiology
http://www.ncbi.nlm.nih.gov/pubmed/26111542
Plant &
Animal
2015 De novo genome analysis Permanent draft genome sequence of sulfoquinovose-degrading Pseudomonas putida strain SQ1,
Standards in Genomic Sciences
http://www.standardsingenomics.com/content/10/1/42
Micro-
organism
2015 Targeted
sequencing
OCRL1 engages with the F-BAR protein pacsin 2 to promote biogenesis of membrane trafficking intermediates,
Molecular Biology of the Cell
http://www.ncbi.nlm.nih.gov/pubmed/26510499
Human
2015 Targeted
sequencing
Mutations in the Latent TGF-beta Binding Protein 3 (LTBP3) gene cause brachyolmia with amelogenesis imperfecta,
Human Molecular Genetics
http://www.ncbi.nlm.nih.gov/pubmed/25669657
Human
2015 Microbiome
sequencing
Modulation of gut microbiota in rats fed high‐fat diets by processing whole‐grain barley to barley malt,
Molecular Nutrition & Food Research
http://www.ncbi.nlm.nih.gov/pubmed/26184884
Micro-
organism
2015 Targeted
sequencing
Methylation status of HPV16 E2‐binding sites classifies subtypes of HPV‐associated oropharyngeal cancers,
Cancer
http://www.ncbi.nlm.nih.gov/pubmed/25731880
Human,
Microorganism
2015 Targeted
sequencing
Macromolecular crowding creates heterogeneous environments of gene expression in picolitre droplets,
Nature Nanotechnology
http://www.ncbi.nlm.nih.gov/pubmed/26501750
Human
2015 Targeted
sequencing
Intrastrand triplex DNA repeats in bacteria: a source of genomic instability,
Nucleic Acids Research
http://www.ncbi.nlm.nih.gov/pubmed/26450966
Micro-
organism
2015 Targeted
sequencing
Insights into the origin of the nuclear localization signals in conserved ribosomal proteins,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/26066547
Human,
Microorganism
2015 Targeted
sequencing
Inflammatory and Non-inflammatory Breast Cancer: A Potential Role for Detection of Multiple Viral DNAs in Disease Progression,
Annals of Surgical Oncology
http://www.ncbi.nlm.nih.gov/pubmed/26508152
Human
2015 Targeted
sequencing
Inefficient microbial production of refractory dissolved organic matter in the ocean,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/26084883
Micro-
organism
2015 Transcriptomics Impact of preconditioning with retinoic acid during early development on morphological and functional characteristics of human induced pluripotent stem cell-derived neurons,
Stem Cell Research
http://www.ncbi.nlm.nih.gov/pubmed/26001168
Human
2015 Targeted
sequencing
Identification of CTNNB1 mutations,
CTNNB1 amplifications,
and an Axin2 splice variant in juvenile angiofibromas,
Tumor Biology
http://www.ncbi.nlm.nih.gov/pubmed/26572152
Human
2015 Targeted
sequencing
Hybrid Structural Analysis of the Arp2/3 Regulator Arpin Identifies Its Acidic Tail as a Primary Binding Epitope,
Structure
http://www.ncbi.nlm.nih.gov/pubmed/26774128
Plant &
Animal
2015 Targeted
sequencing
Human primordial germ cell commitment in vitro associates with a unique PRDM14 expression profile,
The EMBO Journal
http://www.ncbi.nlm.nih.gov/pubmed/25750208
Human,
Microorganism
2015 Targeted
sequencing
Human Papillomavirus Type 18 Genetic Variation and Cervical Cancer Risk Worldwide,
Journal of Virology
http://www.ncbi.nlm.nih.gov/pubmed/26269181
Human,
Microorganism
2015 Targeted
sequencing
Homologues of potato chromosome 5 show variable collinearity in the euchromatin, but dramatic absence ofsequence similarity in the pericentromeric heterochromatin,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/25958312
Plant&
Animal
2015 Targeted
sequencing
HNRNP G and HTRA2-BETA1 regulate estrogen receptor alpha expression with potential impact on endometrial cancer,
BMC Cancer
http://www.ncbi.nlm.nih.gov/pubmed/25777416
Human
2015 Targeted
sequencing
HMGA2 expression pattern and TERT mutations in tumors of the vulva,
Oncology Reports
http://www.ncbi.nlm.nih.gov/pubmed/25823555
Human
2015 Targeted
sequencing
High-Throughput Mycobacterial Interspersed Repetitive-Unit–Variable-Number Tandem-Repeat Genotyping for Mycobacterium tuberculosis Epidemiological Studies,
Journal of Clinical Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/25428144
Micro-
organism
2015 Targeted
sequencing
High‐affinity nitrate/nitrite transporter genes (Nrt2) in Tisochrysis lutea: Identification and expression analyses reveal some interesting specificities of Haptophyta microalgae,
Physiologia Plantarum
http://www.ncbi.nlm.nih.gov/pubmed/25640753
Plant &
Animal
2015 Targeted
sequencing
Glutamate cycling may drive organic anion transport on the basal membrane of human placental syncytiotrophoblast,
Journal of Physiology
http://www.ncbi.nlm.nih.gov/pubmed/26277985
Human
2015 Genomics Genome‐wide association links candidate genes to resistance to Plum Pox Virus in apricot (Prunus armeniaca),
Phytologist
http://www.ncbi.nlm.nih.gov/pubmed/26356603
Plant &
Animal
2015 Targeted
sequencing
Genetic characterization of Chikungunya virus in the Central African Republic,
Infection,
Genetics and Evolution
http://www.ncbi.nlm.nih.gov/pubmed/25911440
Micro-
organism
2015 Targeted
sequencing
Form follows function in geminiviral minichromosome architecture,
Virus Research
http://www.ncbi.nlm.nih.gov/pubmed/25445344
Micro-
organism
2015 Targeted
sequencing
Food Sensing: Selection and Characterization of DNA Aptamers to Alicyclobacillus Spores for Trapping and Detection from Orange Juice,
Journal of Agricultural and Food Chemistry
http://www.ncbi.nlm.nih.gov/pubmed/25639310
Micro-
organism
2015 Targeted
sequencing
Evidence of the Generation of Isosaccharinic Acids and Their Subsequent Degradation by Local Microbial Consortia within Hyper-Alkaline Contaminated Soils,
with Relevance to Intermediate Level Radioactive Waste Disposal,
PLOS One
http://www.ncbi.nlm.nih.gov/pubmed/25748643
Micro-
organism
2015 Targeted
sequencing
Evaluation of BRCA1/2 mutational status among German and Austrian women with triple-negative breast cancer,
Journal of Cancer Research and Clinical Oncology
http://www.ncbi.nlm.nih.gov/pubmed/25971625
Human
2015 Epigenome Epigenetic Aberrations Are Not Specific to Transcription Factor-Mediated Reprogramming,
Stem Cell Reports
http://www.sciencedirect.com/science/article/pii/S2213671115003434
Human
2015 Genomics Draft Genome Sequence of the Quorum-Sensing and Biofilm-Producing Pseudomonas aeruginosa Strain Pae221,
Belonging to the Epidemic High-Risk Clone Sequence Type 274,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/25593247
Micro-
organism
2015 De novo genome analysis Draft Genome Sequence of the Hydrocarbon-Degrading Bacterium Alcanivorax dieselolei KS-293 Isolated from Surface Seawater in the Eastern Mediterranean Sea,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/26659675
Micro-
organism
2015 De novo genome analysis Draft genome sequence of a nitrate-reducing,
o-phthalate degrading bacterium,
Azoarcus sp. strain PA01T,
Standards in Genomic Sciences
http://www.ncbi.nlm.nih.gov/pubmed/26516406
Micro-
organism
2015 De novo genome analysis Draft Genome Sequence of Thermus scotoductus Strain K1,
Isolated from a Geothermal Spring in Karvachar,
Nagorno Karabakh,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/26564055
Micro-
organism
2015 Targeted
sequencing
Diverse Antibody Genetic and Recognition Properties Revealed following HIV-1 Envelope Glycoprotein Immunization,
The Journal of Immunology
http://www.ncbi.nlm.nih.gov/pubmed/25964491
Plant &
Animal
2015 De novo genome analysis Distribution and population structure of the anther smut Microbotryum silenes‐acaulis parasitizing an arctic‐alpine plant,
Molecular Ecology
http://www.ncbi.nlm.nih.gov/pubmed/26671732
Micro-
organism
2015 Transcriptomics Differential expression of the chemosensory transcriptome in two populations of the stemborer Sesamia nonagrioides,
Insect Biochemistry and Molecular Biology
http://www.ncbi.nlm.nih.gov/pubmed/26316282
Plant &
Animal
2015 Microbiome
sequencing
Diet is the primary determinant of bacterial community structure in the guts of higher termites,
Molecular Ecology
http://www.ncbi.nlm.nih.gov/pubmed/26348261
Micro-
organism
2015 Targeted
sequencing
Determination of methanogenic pathways through carbon isotope (δ13C) analysis for the two-stage anaerobic digestion of high-solids substrates,
Environmental Science & Technology
http://www.ncbi.nlm.nih.gov/pubmed/25741999
Micro-
organism
2015 Targeted
sequencing
Degradation of a textile azo dye using biological treatment followed by photo-Fenton oxidation: evaluation of toxicity and microbial community structure,
Chemical Engineering Journal
http://dx.doi.org/10.1016/j.cej.2015.02.042
Micro-
organism
2015 Transcriptomics Defining the transcriptomic landscape of Candida glabrata by RNA-Seq,
Nucleic Acids Research
http://www.ncbi.nlm.nih.gov/pubmed/25586221
Micro-
organism
2015 Targeted
sequencing
Cysteine scanning reveals minor local rearrangements of the horizontal helix of respiratory complex,
Molecular Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/26115017
Micro-
organism
2015 Targeted
sequencing
CRISPR interference and priming varies with individual spacer sequences,
Nucleic Acid Research
http://www.ncbi.nlm.nih.gov/pubmed/26586800
Micro-
organism
2015 Microbiome
sequencing
Concentrations of viable oil-degrading microorganisms are increased in feces from Calanus finmarchicus feeding in petroleum oil dispersions,
Marine Pollution Bulletin
http://www.ncbi.nlm.nih.gov/pubmed/26164782
Micro-
organism
2015 De novo genome analysis Complete Genome Sequence of the Gut Commensal and Laboratory Strain Enterococcus faecium 64/3,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/26586871
Micro-
organism
2015 De novo genome analysis Complete Genome Sequence of a CTX-M-15-Producing Klebsiella pneumoniae Outbreak Strain from Multilocus Sequence Type 514,
Genome Announcements
http://www.ncbi.nlm.nih.gov/pubmed/26159529
Micro-
organism
2015 De novo genome analysis Complete genome sequence of Clostridium pasteurianum NRRL B-598,
a non-type strain producing butanol,
Journal of Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/26410453
Micro-
organism
2015 Transcriptomics Comparative Analysis of Transcriptomes from Secondary Reproductives of Three Reticulitermes Termite Species,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/26698123
Plant &
Animal
2015 Genomics Co‐evolutionary dynamics between public good producers and cheats in the bacterium Pseudomonas aeruginosa,
Journal of Evolutionary Biology
http://www.ncbi.nlm.nih.gov/pubmed/26348785
Micro-
organism
2015 Transcriptomics Cardiac remodeling in Gα q and Gα 11 knockout mice,
International Journal of Cardiology
http://www.ncbi.nlm.nih.gov/pubmed/26476043
Plant &
Animal
2015 Microbiome
sequencing
Biotransformation of petroleum hydrocarbons and microbial communities in seawater with oil dispersions and copepod feces,
Marine Pollution Bulletin
http://www.ncbi.nlm.nih.gov/pubmed/26494249
Micro-
organism
2015 Microbiome
sequencing
Bacterial Landscape of Bloodstream Infections in Neutropenic Patients via High Throughput Sequencing,
PLoS One
http://www.ncbi.nlm.nih.gov/pubmed/26270467
Micro-
organism
2015 Targeted
sequencing
Arabidopsis TAF1 is an MRE11‐interacting protein required for resistance to genotoxic stress and viability of the male gametophyte,
The Plant Journal
http://www.ncbi.nlm.nih.gov/pubmed/26358508
Plant &
Animal
2015 Genomics Antibiotic selection pressure determination through sequence-based metagenomics,
Antimicrobial Agents and Chemotherapy
http://www.ncbi.nlm.nih.gov/pubmed/26369961
Human
2015 Metagenome Analysis of metagenomic data reveals common features of halophilic viral communities across continents,
Environmental Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/26472517
Micro-
organism
2015 Microbiome
sequencing
Anaerobic oxidation of methane associated with sulfate reduction in a natural freshwater gas source,
The ISME Journal
http://www.ncbi.nlm.nih.gov/pubmed/26636551
Micro-
organism
2015 Targeted
sequencing
Amid the possible causes of a very famous foxing: molecular and microscopic insight into Leonardo da Vinci's self‐portrait,
Environmental Microbiology Reports
http://www.ncbi.nlm.nih.gov/pubmed/26111623
Micro-
organism
2015 Transcriptomics Amelotin Gene Structure and Expression during Enamel Formation in the Opossum Monodelphis domestica,
PLoS ONE
http://www.ncbi.nlm.nih.gov/pubmed/26186457
Plant &
Animal
2015 Targeted
sequencing
Aldose reductases influence prostaglandin F2α Levels and adipocyte differentiation in male mouse and human species,
Endocrinology
http://www.ncbi.nlm.nih.gov/pubmed/25730106
Human,
Plant &
Animal
2015 Targeted
sequencing
Activation loop phosphorylation regulates B‐Raf in vivo and transformation by B‐Raf mutants,
The EMBO Journal
http://www.ncbi.nlm.nih.gov/pubmed/26657898
Plant &
Animal
2015 Targeted
sequencing
A sting in the spit: widespread cross‐infection of multiple RNA viruses across wild and managed bees,
Journal of Animal Ecology
http://www.ncbi.nlm.nih.gov/pubmed/25646973
Plant &
Animal
2015 Targeted
sequencing
A Quaternary Mechanism Enables the Complex Biological Functions of Octameric Human UDP-glucose Pyrophosphorylase,
a Key Enzyme in Cell Metabolism,
Nature Scientific Reports
http://www.ncbi.nlm.nih.gov/pubmed/25860585
Human
2015 Targeted
sequencing
A proton relay enhances H2O2 sensitivity of GAPDH to facilitate metabolic adaptation,
Nature Chemical Biology
http://www.ncbi.nlm.nih.gov/pubmed/25580853
Human,
Microorganism,
Plant &
Animal
2015 Targeted
sequencing
A GH57 4-α-glucanotransferase of hyperthermophilic origin with potential for alkyl glycoside production,
Applied Microbiology and Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/25693671
Plant &
Animal
2015 De novo genome analysis A Clonal Complex 12 Methicillin-Resistant Staphylococcus aureus Strain,
West Australian MRSA-59,
Harbors a Novel Pseudo-SCCmec Element,
Antimicrobial Agents and Chemotherapy
http://www.ncbi.nlm.nih.gov/pubmed/26349822
Micro-
organism
2015 Transcriptomics A Candida albicans regulator of disseminated infection operates primarily as a repressor and governs cell surface remodeling,
Molecular Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/26700268
Plant &
Animal
2015 Transcriptomics Staphylococcus aureus Survives with a Minimal Peptidoglycan Synthesis Machine but Sacrifices Virulence and Antibiotic Resistance,
PLOS Pathogens
http://www.ncbi.nlm.nih.gov/pubmed/25951442
Micro-
organism
2015 Targeted
sequencing
Pseudozyma aphidis Fungemia after abdominal surgery: First adult case,
Medical Mycology
http://dx.doi.org/10.1016/j.mmcr.2015.03.001
Human,
Microorganism
2015 Transcriptomics Lactobacillus ruminis strains cluster according to their mammalian gut source,
BMC Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/25879663
Micro-
organism
2015 Targeted
sequencing
KRAS mutations in pancreatic circulating tumor cells: a pilot study,
Tumour Biology
http://www.ncbi.nlm.nih.gov/pubmed/26684803
Human
2014 Genomics Whole Genome Sequencing analysis of intrapatient microevolution in Mycobacterium tuberculosis: Potential impact on the inference of tuberculosis transmission,
J Infect Dis
http://www.ncbi.nlm.nih.gov/pubmed/23945373
Micro-
organism
2014 Transcriptome & targeted re-
sequencing
Viral load,
gene expression and mapping of viral integration sites in HPV16‐associated HNSCC cell lines,
International Journal of Cancer
http://www.ncbi.nlm.nih.gov/pubmed/25082736
Human,
Microorganism
2014 Targeted
sequencing
Utilization of organophosphate: phosphate antiporter for isotope‐labeling experiments in E. coli,
FEMS Microbiology Letters
http://www.ncbi.nlm.nih.gov/pubmed/25273627
Micro-
organism
2014 Targeted
sequencing
Universal Single-Probe RT-PCR Assay for Diagnosis of Dengue Virus Infections,
PLOS Neglected Tropical Diseases
http://www.ncbi.nlm.nih.gov/pubmed/25522325
Micro-
organism
2014 Targeted
sequencing
The novel ADAMTS13‐p. D187H mutation impairs ADAMTS13 activity and secretion and contributes to thrombotic thrombocytopenic purpura in mice,
Journal of Thrombosis and Haemostasis
http://www.ncbi.nlm.nih.gov/pubmed/25442981
Plant &
Animal
2014 Metagenome The composition of arbuscular mycorrhizal fungal communities in the roots of a ruderal forb is not related to the forest fragmentation process,
Environmental Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/25243926
Plant &
Animal
2014 Genomics The Complete Genome Sequence of Escherichia coli EC958: A High Quality Reference Sequence for the Globally Disseminated Multidrug Resistant E. coli O25b:H4-ST131 Clone,
PLOS ONE
http://www.ncbi.nlm.nih.gov/pubmed/25126841
Micro-
organism
2014 Genomics The Colonization Dynamics of the Gut Microbiota in Tilapia Larvae,
PLOS ONE
http://www.ncbi.nlm.nih.gov/pubmed/25072852
Micro-
organism
2014 Targeted
sequencing
Tau exon 2 responsive elements deregulated in myotonic dystrophy type I are proximal to exon 2 and synergistically regulated by MBNL1 and MBNL2,
Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease
http://www.ncbi.nlm.nih.gov/pubmed/24440524
Human
2014 Microbiome
sequencing
T lymphocytes control microbial composition by regulating the abundance of Vibrio in the zebrafish gut
Gut Microbes
http://www.ncbi.nlm.nih.gov/pubmed/25536157
Micro-
organism
2014 Targeted
sequencing
Stable Composition of the Nano-and Picoplankton Community during the Ocean Iron,
PLOS ONE
http://www.ncbi.nlm.nih.gov/pubmed/25401706
Microorganism,
Plant &
Animal
2014 Metagenome SIP metagenomics identifies uncultivated Methylophilaceae as dimethylsulphide degrading bacteria in soil and lake sedime,
The ISME Journal
http://www.ncbi.nlm.nih.gov/pubmed/25822481
Micro-
organism
2014 Transcriptomics Screening in Planarians Identifies MORN2 as a Key Component in LC3-Associated Phagocytosis and Resistance to Bacterial Infection,
Cell Host & Microbe
http://www.ncbi.nlm.nih.gov/pubmed/25211076
Microorganism,
Plant &
Animal
2014 Targeted
sequencing
RIPK1 maintains epithelial homeostasis by inhibiting apoptosis and necroptosis,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/25132550
Plant &
Animal
2014 Targeted
sequencing
Re-Sequencing Data for Refining Candidate Genes and Polymorphisms in QTL Regions Affecting Adiposity in Chicken,
PLOS ONE
http://www.ncbi.nlm.nih.gov/pubmed/25333370
Plant &
Animal
2014 Genomics PRO40 Is a Scaffold Protein of the Cell Wall Integrity Pathway,
Linking the MAP Kinase Module to the Upstream Activator Protein Kinase C,
PLOS genetics
http://www.ncbi.nlm.nih.gov/pubmed/25188365
Plant &
Animal
2014 Exome enrichment Prediction of chronic lung allograft dysfunction: a systems medicine challenge,
European Respiratory Journal
http://www.ncbi.nlm.nih.gov/pubmed/24585866
Human
2014 Targeted
sequencing
Novel TNS3-MAP3K3 and ZFPM2-ELF5 fusion genes identified by RNA sequencing in multicystic mesothelioma with t(7;17)(p12;q23) and t(8;11)(q23;p13),
Cancer Letters
http://www.ncbi.nlm.nih.gov/pubmed/25484136
Human
2014 Genomics Large Chromosomal Rearrangements during a Long-Term Evolution Experiment with Escherichia coli,
mBio
http://www.ncbi.nlm.nih.gov/pubmed/25205090
Micro-
organism
2014 Metagenome Importance of soil organic matter for the diversity of microorganisms involved in the degradation of organic pollutants,
The ISME Journal
http://www.ncbi.nlm.nih.gov/pubmed/24430482
Micro-
organism
2014 Targeted
sequencing
Importance of branched-chain amino acid utilization in Francisella intracellular adaptation,
Infection and Immunity
http://www.ncbi.nlm.nih.gov/pubmed/25332124
Micro-
organism
2014 Targeted
sequencing
Implications of Targeted Genomic Disruption of ß-Catenin in BxPC-3 Pancreatic Adenocarcinoma Cells,
PLOS ONE
http://www.ncbi.nlm.nih.gov/pubmed/25536063
Human
2014 Targeted
sequencing
Impact of the HIV integrase genetic context on the phenotypic expression and in vivo emergence of raltegravir resistance mutations,
J. of Antimicrobial Chemotherapy
http://www.ncbi.nlm.nih.gov/pubmed/25336162
Human,
Microorganism
2014 Targeted
sequencing
Identification of Yeast and Human 5-Aminoimidazole-4-carboxamide-1-β-d-ribofuranoside (AICAr) Transporters,
The Journal of Biological Chemistry
http://www.ncbi.nlm.nih.gov/pubmed/24778186
Human,
Plant &
Animal
2014 Targeted
sequencing
High-throughput MIRU-VNTR genotyping for Mycobacterium tuberculosis epidemiological studies.,
Journal of Clinical Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/25428144
Micro-
organism
2014 Targeted
sequencing
High plasma sEPCR levels are associated with increased mortality in children with cerebral malaria in Benin,
Journal of Infectious Diseases
http://www.ncbi.nlm.nih.gov/pubmed/25425698
Human,
Microorganism
2014 Metagenome Halophilic Microorganisms Are Responsible for the Rosy Discolouration of Saline Environments in Three Historical Buildings with Mural Paintings,
PLOS ONE
http://www.ncbi.nlm.nih.gov/pubmed/25084531
Micro-
organism
2014 Transcriptomics Genome-wide transcriptomic responses of the seagrasses Zostera marina and Nanozostera noltii under a simulated heatwave confirm functional types,
Marine Genomics
http://www.ncbi.nlm.nih.gov/pubmed/24703884
Plant &
Animal
2014 Genome & Exome Genome Sequencing of SHH Medulloblastoma Predicts Genotype-Related Response to Smoothened Inhibition,
Cancer Cell
http://www.ncbi.nlm.nih.gov/pubmed/24651015
Human
2014 Genomics Genome sequence of Vibrio diabolicus and identification of the exopolysaccharide HE800 biosynthesis locus,
Applied Microbiology and Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/25273176
Micro-
organism
2014 Genomics Genome analysis of the first Marseilleviridae representative from Australia indicates that most of its genes contribute to the virus fitness,
Journal of Virology
http://www.ncbi.nlm.nih.gov/pubmed/25275139
Micro-
organism
2014 Transcriptomics Gene expression profiling in gills of the great spider crab Hyas araneus in response to ocean acidification and warming,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/25216596
Plant &
Animal
2014 Targeted
sequencing
FXR is a molecular target for the effects of vertical sleeve gastrectomy,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/24670636
Human,
Microorganism
2014 Genomics Error correction and diversity analysis of population mixtures determined by NGS,
PeerJ
http://www.ncbi.nlm.nih.gov/pubmed/25405074
Micro-
organism
2014 Targeted
sequencing
Enhancer hijacking activates GFI1 family oncogenes in medulloblastoma,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/25043047
Human
2014 Targeted
sequencing
Early hypercytokinemia is associated with interferon-induced transmembrane protein-3 dysfunction and predictive of fatal H7N9 infection,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/24367104
Human,
Microorganism,
Plant &
Animal
2014 Targeted
sequencing
DNA-guided DNA interference by a prokaryotic Argonaute,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/24531762
Micro-
organism
2014 Epigenome DNA methylation markers for early detection of women's cancer: promise and challenges,
Epigenomics
http://www.ncbi.nlm.nih.gov/pubmed/25111485
Human
2014 Targeted
sequencing
Diagnostics of Primary Immunodeficiency Diseases: A Sequencing Capture Approach,
PLOS ONE
http://www.ncbi.nlm.nih.gov/pubmed/25502423
Human
2014 Metagenome Current strategies for mobilome research,
Frontiers in Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/25657641
Microorganism,
Plant &
Animal
2014 Targeted
sequencing
CSN-associated USP48 confers stability to nuclear NF-κB/RelA by trimming K48-linked Ub-chains,
Biochimica et Biophysica Acta (BBA) - Molecular Cell Research
http://www.ncbi.nlm.nih.gov/pubmed/25486460
Human
2014 Targeted
sequencing
Creation of targeted genomic deletions using TALEN or CRISPR/Cas nuclease pairs in one-cell mouse embryos,
FEBS Open Bio
http://www.ncbi.nlm.nih.gov/pubmed/23555929
Plant &
Animal
2014 Metagenome Construction of a dairy microbial genome catalog opens new perspectives for the metagenomic analysis of dairy fermented products,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/25496341
Micro-
organism
2014 Metagenome Comparing High-throughput Platforms for Sequencing the V4 Region of SSU-rDNA in Environmental Microbial Eukaryotic Diversity Surveys,
J Eukaryot Microbiol.
http://www.ncbi.nlm.nih.gov/pubmed/25312509
Micro-
organism
2014 Targeted
sequencing
Clostridium cluster I and their pathogenic members in a full-scale operating biogas plant,
Applied Microbiology and Biotechnology
http://www.ncbi.nlm.nih.gov/pubmed/25472441
Micro-
organism
2014 Targeted
sequencing
Ancient DNA Analysis Reveals High Frequency of European Lactase Persistence Allele (T-13910) in Medieval Central Europe,
PLoS ONE
http://www.ncbi.nlm.nih.gov/pubmed/24465990
Human
2014 Transcriptomics An Avian Retrovirus Uses Canonical Expression and Processing Mechanisms To Generate Viral MicroRNA,
J. Virol.
http://www.ncbi.nlm.nih.gov/pubmed/24155381
Micro-
organism
2014 Metagenome Abiotic stress tolerance and competition‐related traits underlie phylogenetic clustering in soil bacterial communities,
Ecology Letters
http://www.ncbi.nlm.nih.gov/pubmed/25130277
Micro-
organism
2014 Transcriptomics ABC transporters are involved in defense against permethrin insecticide in the malaria vector Anopheles stephensi,
Parasites & Vectors
http://www.ncbi.nlm.nih.gov/pubmed/25073980
Plant &
Animal
2014 Targeted
sequencing
A MAT1-2 wild-type strain from Penicillium chrysogenum: Functional mating-type locus characterization,
genome sequencing,
and mating with an industrial penicillin-producing strain,
Molecular Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/25521009
Micro-
organism
2013 Genomics The wheat powdery mildew genome shows the unique evolution of an obligate biotroph,
Nature Genetics
http://www.ncbi.nlm.nih.gov/pubmed/23852167
Plant &
Animal
2013 Metagenome The ignored diversity: complex bacterial communities in intensive care units revealed by 16S pyrosequencing,
Scientific Reports NPG
http://www.ncbi.nlm.nih.gov/pubmed/23475210
Micro-
organism
2013 Targeted
sequencing
The helicase-binding domain of Escherichia coli DnaG primase interacts with the highly conserved C-terminal region of single-stranded DNA-binding protein,
Nucleic Acids Research
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3632105
Micro-
organism
2013 Targeted
sequencing
Structure of the Legionella effector AnkX reveals the mechanism of phosphocholine transfer by the FIC domain,
The EMBO Journal
http://www.ncbi.nlm.nih.gov/pubmed/23572077
Micro-
organism
2013 Genomics Stabilization of cooperative virulence by the expression of an avirulent phenotype,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/23426324
Micro-
organism
2013 Transcriptomics RNAseq versus genome-predicted transcriptomes: a large population of novel transcripts identified in an Illumina-454 Hydra transcriptome,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/23530871
Plant &
Animal
2013 Transcriptomics RNA deep sequencing reveals novel candidate genes and polymorphisms in boar testis and liver tissues with divergent androstenone levels,
PLoS
http://www.ncbi.nlm.nih.gov/pubmed/23696805
Plant &
Animal
2013 Targeted
sequencing
Recurrent somatic alterations of FGFR1and NTRK2 in pilocytic astrocytoma,
Nature Genetics
http://www.ncbi.nlm.nih.gov/pubmed/23817572
Human
2013 Targeted
sequencing
Pregnancy-specific glycoproteins bind integrin αIIbβ3 and inhibit the platelet-fibrinogen interaction,
PLoS
http://www.ncbi.nlm.nih.gov/pubmed/23469002
Human
2013 Genomics Predominant archaea in marine sediments degrade detrital proteins,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/23535597
Micro-
organism
2013 Targeted
sequencing
Multiplex Identification of Human Papillomavirus 16 DNA Integration Sites in Cervical Carcinomas,
PLoS
http://www.ncbi.nlm.nih.gov/pubmed/23824673
Human
2013 Targeted
sequencing
Malignant astrocytomas of elderly patients lack favorable molecular markers: an analysis of the NOA-08 study collective,
Neuro Oncology
http://www.ncbi.nlm.nih.gov/pubmed/23595628
Human
2013 Metagenome Insights into functional bacterial diversity and its effects on Alpine bog ecosystem functioning,
Scientific Reports NPG
http://www.ncbi.nlm.nih.gov/pubmed/23739741
Micro-
organism
2013 Metagenome Impact of oil on bacterial community structure in bioturbated sediments,
PLoS
http://www.ncbi.nlm.nih.gov/pubmed/23762350
Micro-
organism
2013 Metagenome Gut metagenome in European women with normal,
impaired and diabetic glucose,
Nature
http://www.ncbi.nlm.nih.gov/pubmed/23719380
Human
2013 Targeted
sequencing
GRIN2A mutations in acquired epileptic aphasia and related childhood focal epilepsies and encephalopathies with speech and language dysfunction,
Nature Genetics
http://www.ncbi.nlm.nih.gov/pubmed/23933820
Human
2013 Targeted
sequencing
Fusion of ZMYND8 and RELAGenes in Acute Erythroid Leukemia,
PLoS
http://www.ncbi.nlm.nih.gov/pubmed/23667654
Human
2013 Transcriptomics Folding and self-assembly of the TatA translocation pore based on a charge zipper mechanism,
Cell
http://www.ncbi.nlm.nih.gov/pubmed/23332763
Human,
Microorganism,
Plant &
Animal
2013 Targeted
sequencing
Expression of recombinant human complement C1q allows identification of the C1r/C1s-binding Sites,
PNAS
http://www.ncbi.nlm.nih.gov/pubmed/23650384
Human
2013 Metagenome Evidence for successional development in Antarctic hypolithic bacterial communities,
The ISME Journal
http://www.ncbi.nlm.nih.gov/pubmed/23765099
Micro-
organism
2013 Targeted
sequencing
Establishment of totipotency does not depend on Oct4A,
Nature Cell Biology
http://www.ncbi.nlm.nih.gov/pubmed/23934214
Human
2013 Targeted
sequencing
CRISPR interference directs strand specific spacer acquisition,
PLoS
http://www.ncbi.nlm.nih.gov/pubmed/22558257
Micro-
organism
2013 Transcriptomics Characterization of salt-adapted secreted lignocellulolytic enzymes from the mangrove fungus Pestalotiopsis sp.,
Nature Communications
http://www.ncbi.nlm.nih.gov/pubmed/23651998
Plant &
Animal
2013 Transcriptomics Changes in the transcriptome of the malaria parasite Plasmodium falciparum during the initial phase of transmission from the human to the mosquito,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/23586929
Micro-
organism
2013 Metagenome Archaeal and anaerobic methane oxidizer communities in the Sonora Margin cold seeps,
Guaymas Basin (Gulf of California),
The ISME Journal
http://www.ncbi.nlm.nih.gov/pubmed/23446836
Micro-
organism
2013 Targeted
sequencing
APOBEC3G impairs the multimerization of the HIV-1 Vif protein in living cells,
Journal of Virology
http://www.ncbi.nlm.nih.gov/pubmed/23576497
Micro-
organism
2013 Transcriptomics Activation-induced cytidine deaminase (AID) is strongly expressed in the fetal bovine ileal Peyer’s patch and spleen and is associated with expansion of the primary antibody repertoire in the absence of exogenous antigens,
Mucosla Immunology
http://www.ncbi.nlm.nih.gov/pubmed/23299615
Plant &
Animal
2013 Transcriptomics Absence of major histocompatibility complex class II mediated immunity in pipefish, Syngnathus typhle: evidence from deep transcriptome sequencing
Biology Letters
http://www.ncbi.nlm.nih.gov/pubmed/23445951
Plant&
Animal
2013 Metagenome A Metagenomic Study Highlights Phylogenetic Proximity of Quorum-Quenching and Xenobiotic-Degrading Amidases of the AS-Family,
PLoS
http://www.ncbi.nlm.nih.gov/pubmed/23762380
Micro-
organism
2012 Genomics Whole-Genome Sequencing of Sodaria macrospora Mutants Identifies Developmental Genes,
G3 (Bethesda,
MD.)
http://www.ncbi.nlm.nih.gov/pubmed/22384404
Plant &
Animal
2012 Metagenome The human small intestinal microbiota is driven by rapid uptake and conversion of simple carbohydrates,
International Society for Microbial Ecology
http://www.ncbi.nlm.nih.gov/pubmed/22258098
Micro-
organism
2012 Transcriptomics The architecture and ppGpp-dependent expression of the primary transcriptome of Salmonella Typhimurium during invasion gene expression,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/22251276
Micro-
organism
2012 Metagenome Similar diversity of Alphaproteobacteria and nitrogenase gene amplicons on two related Sphagnum mosses,
Frontiers in Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/22294982
Microorganism,
Plant &
Animal
2012 Genomics rplC T460C identified as a dominant mutation in linezolid resistant Mycobacterium tuberculosis strains,
Antimicrobial Agents and Chemotherapy
http://www.ncbi.nlm.nih.gov/pubmed/22371899
Micro-
organism
2012 Transcriptomics Revealing stable processing products from ribosome-associated small RNAs by deep-sequencing data analysis,
Nucleic Acids Research
http://www.ncbi.nlm.nih.gov/pubmed/22266655
Micro-
organism
2012 Genomics Novel Streptococcus infantarius subsp. Infantarius variants harboring lactose metabolism genes homologous to Streptococcus thermophilus,
Journal of General Virology
http://dx.doi.org/10.1016/j.fm.2012.02.001
Micro-
organism
2012 Genomics Multilocus sequence phylogenetic analysis of Avibacterium,
Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/22241047
Micro-
organism
2012 Transcriptomics Identifying core features of adaptive metabolic mechanisms for chronic heat stress attenuation contributing to systems robustness,
Genome research
http://www.ncbi.nlm.nih.gov/pubmed/22402787
Plant &
Animal
2012 Genomics Identification of novel causative genes determining the complex trait of high ethanol tolerance in yeast using pooled-segregant whole-genome sequence analysis,
Genome Research
http://www.ncbi.nlm.nih.gov/pubmed/22399573
Plant &
Animal
2012 Metagenome Human skin microbiota: high diversity of DNA viruses identified on the human skin by high throughput sequencing,
PLoS
http://www.ncbi.nlm.nih.gov/pubmed/22723863
Micro-
organism
2012 Genomics Genotype of a historic strain of Mycobacterium tuberculosis,
PNAS
http://www.ncbi.nlm.nih.gov/pubmed/23091009
Micro-
organism
2012 Genomics EmaxDB: Avalibility of a first draft genome sequence for the apicomlexan Eimeria maxima,
Molecular and Biochemical Parasitology
http://www.ncbi.nlm.nih.gov/pubmed/22465442
Plant &
Animal
2012 Transcriptomics Deep Sequencing Reveals Differences in the Transcriptional Landscapes of Fibers from Two Cultivated Species of Cotton,
PLoS
http://www.ncbi.nlm.nih.gov/pubmed/23166598
Plant &
Animal
2012 Metagenome Candidatus Arthromitus' revised: segmented filamentous bacteria in arthropod guts are members of Lachnospiraceae,
Environmental Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/22436008
Micro-
organism
2012 Transcriptomics An interspecies regulatory network inferred from simultaneous RNA-seq of Candida albicans invading innate immune cells,
Frontiers in Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/22416242
Plant &
Animal
2012 Genomics After the bottleneck: Genome-wide diversification of the Mycobacterium tuberculosis complex by mutation,
recombination,
and natural selection,
Genome Research
http://www.ncbi.nlm.nih.gov/pubmed/22377718
Micro-
organism
2011 Genomics Whole-genome comparison of two Acinetobacter baumannii isolates from a single patient,
where resistance developed during tigecycline therapy,
The Journal of Antimicrobial Chemotherapy
http://www.ncbi.nlm.nih.gov/pubmed/21565804
Micro-
organism
2011 Transcriptomics Transcriptomic Evidence That Longevity of Acquired Plastids in the Photosynthetic Slugs Elysia timida and Plakobranchus ocellatus Does Not Entail Lateral Transfer of Algal Nuclear Genes,
Molecular Biology and Evolution
http://www.ncbi.nlm.nih.gov/pubmed/20829345
Plant &
Animal
2011 Genomics The Genome of a European Fresh Vegetable Food Safety Outbreak Strain Salmonella enterica subsp. Enterica serovar Weltevreden,
Journal of Bacteriology
http://www.ncbi.nlm.nih.gov/pubmed/21296964
Micro-
organism
2011 Genomics Stock culture heterogeneity rather than new mutational variation complicates short-term cell physiology studies of Escherichia coli K-12 MG1655 in continuous culture,
Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/21700661
Micro-
organism
2011 Genomics Role of bacteriophage SPP1 tail spike protein gp21 on host cell receptor binding and trigger of phage DNA ejection,
Molecular Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/22171743
Micro-
organism
2011 Transcriptomics Regulatory Mechanisms Underlying Oil Palm Fruit Mesocarp Maturation,
Ripening,
and Functional Specialization in Lipid and Carotenoid Metabolism,
Plant Physiology
http://www.ncbi.nlm.nih.gov/pubmed/21487046
Plant &
Animal
2011 Transcriptomics Red and Problematic Green Phylogenetic Signals among Thousands of Nuclear Genes from the Photosynthetic and Apicomplexa-Related Chromera velia,
Genome Biology and Evolution
http://www.ncbi.nlm.nih.gov/pubmed/21965651
Plant &
Animal
2011 Metagenome Pyrosequencing of Antibiotic-Contaminated River. Sediments Reveals High Levels of Resistance and Gene Transfer Elements,
PloS One
http://www.ncbi.nlm.nih.gov/pubmed/21359229
Micro-
organism
2011 Genomics Physiological and Toxic Effects of Purine Intermediate 5-Amino-4-imidazolecarboxamide Ribonucleotide (AICAR) in Yeast,
The Journal of Biological Chemistry
http://www.ncbi.nlm.nih.gov/pubmed/21757731
Plant &
Animal
2011 Genomics New Clues about the Evolutionary History of Metabolic Losses in Bacterial Endosymbionts,
Provided by the Genome of Buchnera aphidicola from the Aphid Cinara tujafilina,
Applied and Environmental Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/21571878
Micro-
organism
2011 Genomics Molecular description and industrial potential of Tn6098-mediated conjugative transfer of alpha-galactosides metabolism in Lactococcus lactis,
Applied and Environmental Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/21115709
Micro-
organism
2011 Metagenome Microarray analysis and barcoded pyrosequencing provide consistent microbial profiles depending on the source of human intestinal samples,
Applied and Environmental Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/21257804
Micro-
organism
2011 Targeted
sequencing
Lentiviral vector common integration sites in preclinical models and a clinical trial reflect a benign integration bias and not oncogenic selection,
Blood
http://www.ncbi.nlm.nih.gov/pubmed/21403130
Micro-
organism
2011 Genomics Identification of the First Human Gyrovirus,
a Virus Related to Chicken Anemia Virus,
Journal of Virology
http://www.ncbi.nlm.nih.gov/pubmed/21632766
Micro-
organism
2011 Genomics Human Polyomavirus Related to African Green Monkey Lymphotropic Polyomavirus,
Emerging Infectious Diseases
http://www.ncbi.nlm.nih.gov/pubmed/21801611
Micro-
organism
2011 Transcriptomics Functional genomics of the initial phase of coldadaptation of Pseudomonas putida KT2440,
FEMS Microbiology Letters
http://www.ncbi.nlm.nih.gov/pubmed/21306427
Micro-
organism
2011 Genomics Full length de novo sequence of the Chlamydophila psittaci type strain 6BC,
Journal of Bacteriology
http://www.ncbi.nlm.nih.gov/pubmed/21441521
Micro-
organism
2011 Transcriptomics Evolution of c4 photosynthesis in the genus flaveria: how many and which genes does it take to make c4?,
Plant Cell
http://www.ncbi.nlm.nih.gov/pubmed/21705644
Plant &
Animal
2011 Genomics Distant Mimivirus relative with a larger genome highlights the fundamental features of Megaviridae,
PNAS
http://www.ncbi.nlm.nih.gov/pubmed/21987820
Micro-
organism
2011 Genomics Complete Genome Sequences of Four Mammalian Isolates of Chlamydophila psittaci,
Journal of Bacteriology
http://www.ncbi.nlm.nih.gov/pubmed/21705611
Micro-
organism
2011 Genomics Complete Genome Sequence of Lactococcus lactis subsp. Lactis KF147,
a Plant-Associated Lactic Acid,
Bacterium Journal of Bacteriology
http://www.ncbi.nlm.nih.gov/pubmed/20348266
Micro-
organism
2011 Transcriptomics Assembly,
Gene Annotation and Marker Development Using 454 Floral Transcriptome Sequences in Ziziphus Celata (Rhamnaceae),
a Highly Endangered,
Florida Endemic Plant,
DANN Research
http://www.ncbi.nlm.nih.gov/pubmed/22039173
Plant &
Animal
2011 Transcriptomics Pseudomonas putida KT2440 genome update by cDNA sequencing and microarray transcriptomics,
Environmental Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/21355971
Micro-
organism
2010 Transcriptomics Transcriptome sequencing in an ecologically important tree species: assembly,
annotation,
and marker discovery,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/20233449
Plant &
Animal
2010 Genomics The genome sequence of the cyanobacterium Oscillatoria sp. PCC 6506 reveals several gene clusters responsible for the biosynthesis of toxins and secondary metabolites,
Journal of Bacteriology
http://www.ncbi.nlm.nih.gov/pubmed/20675499
Micro-
organism
2010 Transcriptomics The Differential Evolutionary Dynamics of Avian Cytokine and TLR Gene Classes,
Journal of Immunology
http://www.ncbi.nlm.nih.gov/pubmed/20483729
Plant &
Animal
2010 Targeted
sequencing
Targeted resequencing of candidate genes using selector probes,
Nucleic Acids Research
http://www.ncbi.nlm.nih.gov/pubmed/21059679
Human
2010 Genomics Molecular diagnosis for heterogeneous genetic diseases with targeted high-throughput DNA sequencing applied to retinitis pigmentosa,
Journal of Medical Genetics
http://www.ncbi.nlm.nih.gov/pubmed/21147909
Human
2010 Metagenome Metagenome of the Mediterranean deep chlorophyll maximum studied by direct and fosmid library 454 pyrosequencing,
International Society for Microbial Ecology
http://www.ncbi.nlm.nih.gov/pubmed/20393571
Micro-
organism
2010 Genomics Complete Genome Sequence of Cronobacter turicensis LMG 23827,
a Food-Borne Pathogen Causing Deaths in Neonates,
Journal of Bacteriology
http://www.ncbi.nlm.nih.gov/pubmed/21037008
Micro-
organism
2010 Genomics A Two-Component Regulatory System Interconnects Resistance to Polymyxins,
Aminoglycosides,
Fluoroquinolones,
and Beta-Lactams in Pseudomonas aeruginosa,
Antimicrobial Agents and Chemotherapy
http://www.ncbi.nlm.nih.gov/pubmed/21149619
Micro-
organism
2010 Genomics A multiresistance megaplasmid pLG1 bearing a hylEfm genomic island in hospital Enterococcus faecium isolates,
International Journal of Medical Microbiology
http://www.ncbi.nlm.nih.gov/pubmed/20951641
Micro-
organism
2009 Metagenome Large-scale parallel 454 sequencing reveals host ecological group specificity of arbuscular mycorrhizal fungi in a boreonemoral forest,
The New Phytologist
http://www.ncbi.nlm.nih.gov/pubmed/19558424
Plant &
Animal
2009 Regulome Identification of nutrient-responsive Arabidopsis and rapeseed microRNAs by comprehensive real-time polymerase chain reaction profiling and small RNA sequencing,
Plant Physiology
http://www.ncbi.nlm.nih.gov/pubmed/19465578
Plant &
Animal
2009 Genomics Genome,
secretome and glucose transport highlight unique features of the protein production host Pichia pastoris,
Microbial Cell Factories
http://www.ncbi.nlm.nih.gov/pubmed/19490607
Plant &
Animal
2009 Genomics Genome diversity of Pseudomonas aeruginosa PAO1 laboratory strains,
Microbial Cell Factories
http://www.ncbi.nlm.nih.gov/pubmed/20023018
Micro-
organism
2009 Transcriptomics A genome-wide survey of sRNAs in the symbiotic nitrogen-fixing alpha-proteobacterium Sinorhizobium meliloti,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/20398411
Micro-
organism
2008 Genomics Low-pass shotgun sequencing of the barley genome facilitates rapid identification of genes,
conserved non-coding sequences and novel repeats,
BMC Genomics
http://www.ncbi.nlm.nih.gov/pubmed/18976483
Plant &
Animal