Next Generation Sequencing with GATC

All leading sequencing technologies in one lab

GATC uses three leading high and ultra high throughput sequencing technologies:

ABI 3730XL
Roche GS FLX
Illumina Genome Analyzer

The next-gen technologies and GATC's nearly two decades of experience in sequencing provide you with a versatile and powerful tool kit for choosing the best method for your specific project!

Next Generation Bioinformatics Services

Data analysis for Next Generation sequencing data (PDF)

Next-Gen Analysis and Utility
The combination of different technologies and bioinformatics tools provide the best results (PDF)

Analyses and visualisation of sequence data from Roche GS FLX, Illumina Genome Analyzer and ABI 3730XL

Next Generation Sequencing and Bioinformatic Services at GATC (PDF)

Technical specification sheets

Choose the technology that fits your project! Benefit from our experience to tailor complete sequencing solutions and programmes to meet your individual requirements!

ABI 3730XL
(Applied Biosystems/Sanger)

up to 1.100 bases/read
96 reads/run
approx. 1 MB/day and machine

First choice for finishing projects; full length cDNA sequencing; single sample sequencing.

GS FLX/454
(Roche Diagnostics)

up to 250 bases/read
up to 400.000 reads/run
up to 100 MB/run/7.5 hours

Optimal for de novo sequencing (procaryots & eucaryots), metagenomes, transcriptomes/cDNA, BAC/fosmid pools

Genetic Analyzer/Solexa
(Illumina)

up to 50 bases/read
up to 60 Mio reads/run (paired-end)
up to 2.000 MB/run/6.5 days
Sequencing by synthesis

Highly attractive for resequencing projects of e.g. production strains; small RNA, SAGE and ChIP; ultra-deep sequencing of SNPs or mutations.

Bioinformatic data analysis

As the new technologies will produce vast amounts of raw data, bioinformatic data analysis is the crucial key challenge.

GATC offers a wide bioinformatics platform consisting of powerful assembly and annotation engines to meet your needs:

Visualisation in Genome Browser
Whole genome alignment
Proprietary repeat handling
SNP report
Proprietary indel analysis
Coverage visualisation
FASTA files
Base quality scores
Transcriptome tag analysis
ChIP-Seq analysis
De novo assembly
Sequencing run quality analysis & statistical report
Whole genome mapping ...

GATC Qualification

Nearly two decades of experience with genome projects
for academy and industry worldwide.

ISO 9001:2000 certification that guarantees highest production
quality standards

Reference genome projects

More information on Next Generation Sequencing Technologies

www.genome-sequencing.com

www.illumina.com

www.helicosbio.com

http://visigenbio.com

Contact us for an individual quote

Interested in discussing how to achieve your project goals and receive an individual quote?

Please contact:

Dr. Kerstin A. Stangier

Email: k.stangier@gatc-biotech.com
Tel.: +49 (0)7531 816065

Or send your request either to: customerservice@gatc-biotech.com
or via internet contact form.