Dear CONSERT partner!   If you'd like to analyse insertion sites of retroviral vectors in the host genome, you will find all necessary information regarding the CONSERT LAM-PCR sequencing the CONSERT LAM-PCR database your CONSERT contacts at GATC right here!

Analysis of vector integration sites in the genome

Data Management and data security

• Collection of all CONSERT sequence data in a single place for storage and evaluation
• User management for each group to allow the controlled access of the users
• Development of various search functions according to the users' demands
  
  
  GATC's LAM-PCR database - click here
  
  
  

• Automatic vector trimming to remove viral & linker sequences
• BLAST comparison to the genome, listing of insertion sites, automatic assignment of genomic location and highlighting of uncertain sites to be reviewed
• Identification of genes or regulatory regions that are disrupted by the insertion
• Visualisation of the insertion sites in a genome browser
• Visualisation of the sites and their distribution in the genome & on each chromosome

• Based on open web standards
• Data uploads and analysis are done via a standard web browser
• Database is SSL encrypted (128bit)
• No need to install any third party software
• Data can be retrieved from anywhere in the world

If you wish that above services should be paid with CONSERT EU funds, please contact the work package coordinator Prof. Christof von Kalle (christof.kalle@cchmc.org) in adance for clarification regarding resource allocation.

If we do not receive written confirmation by Prof. von Kalle about the payment, please understand that we have to invoice you for the services provided. Thank you.

Petra and Anita ensure that a scientific sales manager
responsible for your territory will contact you immediately.