
We also carry our alignments of your sequencing data with respect to known reference sequences. The focus here is frequently on the discovery of polymorphisms and structural variations. The results of the alignment of so-called re-sequencing projects are supplied in various file formats - in text format, but also in ace and gff format for a possible visualization. For additional variation analyses we use proprietary bioinformatics tools. You will receive the results of these analyses in txt or xls format.
| Method | File format |
|---|---|
| Alignment /Mapping | fasta & qual und ace / gff |
| SNP Analyse | gff & xls |
| InDel Tabelle | txt / xls |
(D) +49 - 7531 81 60 68
(F) +33 - 4 91 82 84 88
(GB) +44 - 207 691 4921
(S) +46 - 8 655 3609
Opening hours:
8 am - 6 pm CET (Mon-Fri)
Roche GS De Novo Assembler (454 Life Science / Roche)
MIRA (Mimicking Intelligent Read Assembly, Bastien Chevreux)
Velvet (EMBL-EBI, Cambridge, UK)
Edena (Exact De Novo Assembler)
ELAND (Efficient Large-Scale Alignment of Nucleotide Databases)
Mosaik (Reference guided aligner/assembler)
MAQ (Mapping and Assembly with Qualities)
SOAP (Short Oligonucleotide Alignment Program)
More software for Next Generation sequencing...