
The aim of a project with already existing sequence data determines not only the choice of sequencing technology or combination of two or more technologies, but it also dictates the efficient use of bioinformatics approaches to the solution.
There are many questions, such as: Which of the software tools available are able to process and analyze the volumes of data? How can one rate the quality of the analysis? Does it make sense to store raw data for future research?
We can help you with the answers. You will receive not only the raw data of the sequencing, detailed and clear analysis tables, reports, diagrams and bioinformatics statistics, but also individual, customized advice and personal support, of course – even after the project is completed.
| Technology | data format |
|---|---|
| ABI 3730 xl | abi |
| Roche GS FLX | fasta, qual & sff |
| Illumina Genome Analyzer | fasta, qual & scarf |
(D) +49 (0) 7531 81 60 68
(F) +33 (0) 4 91 82 84 88
(GB) +44 (0) 207 691 4921
(S) +46 (0) 8 655 3609
DNASTAR (Sequence analysis, gene expression analysis, data visualisation)
Roche GS De Novo Assembler (454 Life Science / Roche)
MIRA (Mimicking Intelligent Read Assembly, Bastien Chevreux)
Velvet (EMBL-EBI, Cambridge, UK)
Edena (Exact De Novo Assembler)
ELAND (Efficient Large-Scale Alignment of Nucleotide Databases)
Mosaik (Reference guided aligner/assembler)
MAQ (Mapping and Assembly with Qualities)
SOAP (Short Oligonucleotide Alignment Program)
More software for Next Generation sequencing...